Sukharev S, Durell S R, Guy H R
Department of Biology, University of Maryland, College Park, Maryland 20742, USA.
Biophys J. 2001 Aug;81(2):917-36. doi: 10.1016/S0006-3495(01)75751-7.
Three-dimensional structural models of the mechanosensitive channel of large conductance, MscL, from the bacteria Mycobacterium tuberculosis and Escherichia coli were developed for closed, intermediate, and open conformations. The modeling began with the crystal structure of M. tuberculosis MscL, a homopentamer with two transmembrane alpha-helices, M1 and M2, per subunit. The first 12 N-terminal residues, not resolved in the crystal structure, were modeled as an amphipathic alpha-helix, called S1. A bundle of five parallel S1 helices are postulated to form a cytoplasmic gate. As membrane tension induces expansion, the tilts of M1 and M2 are postulated to increase as they move away from the axis of the pore. Substantial expansion is postulated to occur before the increased stress in the S1 to M1 linkers pulls the S1 bundle apart. During the opening transition, the S1 helices and C-terminus amphipathic alpha-helices, S3, are postulated to dock parallel to the membrane surface on the perimeter of the complex. The proposed gating mechanism reveals critical spatial relationships between the expandable transmembrane barrel formed by M1 and M2, the gate formed by S1 helices, and "strings" that link S1s to M1s. These models are consistent with numerous experimental results and modeling criteria.
构建了来自结核分枝杆菌和大肠杆菌的大电导机械敏感通道(MscL)在关闭、中间和开放构象下的三维结构模型。建模工作始于结核分枝杆菌MscL的晶体结构,它是一种同五聚体,每个亚基有两个跨膜α螺旋,即M1和M2。晶体结构中未解析的前12个N端残基被建模为一个两亲性α螺旋,称为S1。推测一束五个平行的S1螺旋形成一个细胞质门。随着膜张力诱导扩张,假定M1和M2的倾斜度会随着它们远离孔轴而增加。在S1与M1连接子中的应力增加导致S1束分离之前,假定会发生大量扩张。在开放转变过程中,推测S1螺旋和C端两亲性α螺旋S3会平行于复合物周边的膜表面对接。所提出的门控机制揭示了由M1和M2形成的可扩张跨膜桶、由S1螺旋形成的门以及将S1连接到M1的“链”之间的关键空间关系。这些模型与众多实验结果和建模标准一致。