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从多氯联苯污染场地分离出的15株好氧菌株的多氯联苯降解活性及杂交分析

Polychlorinated biphenyl degradation activities and hybridization analyses of fifteen aerobic strains isolated from a PCB-contaminated site.

作者信息

Fedi S, Carnevali M, Fava F, Andracchio A, Zappoli S, Zannoni D

机构信息

Department of Biology, University of Bologna, Italy.

出版信息

Res Microbiol. 2001 Jul-Aug;152(6):583-92. doi: 10.1016/s0923-2508(01)01233-5.

Abstract

Fifteen bacterial strains using biphenyl as sole carbon and energy source, obtained from different positions and depths of a polychlorinated biphenyl (PCB)-contaminated area, were analyzed for their basic metabolic phenotypes and subjected to genomic DNA hybridization screening for the presence of well characterized bph operons such as those of Pseudomonas pseudoalcaligenes KF707 and Rhodococcus globerulus P6. Most of the isolates belonged to the gamma-subdivision (Pseudomonas stutzeri, P. plutida, P. fluorescens and Vibrio logei species) and to the beta-subdivision (genera Alcaligenes, Comamonas, Ralstonia) of the Proteobacteria. All the isolates were able to cometabolize different low chlorinated PCB congeners. Among the dichlorinated biphenyls tested, a lower degradation capacity was observed for the di-ortho substituted congeners, whereas high levels of degradation were observed for the di-meta and di-para isomers, whether they were chlorinated on one or on both rings. The PCB congeners nonsubstituted in the 2,3 or 2,3 and 3,4 positions were also degraded by most of the isolated strains, which were, however, unable to significantly metabolize PCBs with more than 3 chlorine atoms. Five of the isolated strains were also able to degrade some of the tri- and tetrachlorobiphenyls tested. Southern hybridization analysis showed a strong homology between four of the fifteen isolated strains and the bph operon obtained from P. pseudoalcaligenes strain KF707. Conversely, none of the isolates here examined showed homology with the bph operon of R. globerulus strain P6. In line with this, the KF707 bph probe strongly hybridized with DNA of a significant number of bacterial colonies obtained from selected locations in the contaminated area using biphenyl-supplemented minimal medium agar plates.

摘要

从多氯联苯(PCB)污染区域的不同位置和深度获取了15株以联苯作为唯一碳源和能源的细菌菌株,对其基本代谢表型进行了分析,并对其基因组DNA进行杂交筛选,以检测是否存在特征明确的bph操纵子,如假产碱假单胞菌KF707和球形红球菌P6的bph操纵子。大多数分离株属于变形菌门的γ-亚类(施氏假单胞菌、恶臭假单胞菌、荧光假单胞菌和洛氏弧菌)和β-亚类(产碱菌属、丛毛单胞菌属、罗尔斯通氏菌属)。所有分离株都能够共代谢不同的低氯代PCB同系物。在所测试的二氯联苯中,观察到邻位二取代同系物的降解能力较低,而间位和对位二异构体的降解水平较高,无论它们是在一个环还是两个环上被氯化。在2,3或2,3和3,4位未被取代的PCB同系物也能被大多数分离菌株降解,然而,这些菌株无法显著代谢含3个以上氯原子的PCB。5株分离菌株还能够降解一些所测试的三氯和四氯联苯。Southern杂交分析表明,15株分离菌株中的4株与从假产碱假单胞菌菌株KF707获得的bph操纵子具有很强的同源性。相反,这里检测的分离株均未显示与球形红球菌菌株P6的bph操纵子具有同源性。与此一致的是,KF707 bph探针与使用补充联苯的基本培养基琼脂平板从污染区域选定位置获得的大量细菌菌落的DNA强烈杂交。

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