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用于同时比色检测橄榄树中六种RNA病毒的单步多重逆转录聚合酶链反应

Single-step multiplex RT-PCR for simultaneous and colourimetric detection of six RNA viruses in olive trees.

作者信息

Bertolini E, Olmos A, Martínez M C, Gorris M T, Cambra M

机构信息

Departamento de Protección Vegetal y Biotecnología, Laboratorio de Virología e Inmunología, Instituto Valenciano de Investigaciones Agrarias, Apartado oficial, 46113 Moncada Valencia, Spain.

出版信息

J Virol Methods. 2001 Jul;96(1):33-41. doi: 10.1016/s0166-0934(01)00313-5.

DOI:10.1016/s0166-0934(01)00313-5
PMID:11516487
Abstract

A single-step multiplex RT-PCR was developed for the simultaneous and colourimetric detection of six RNA viruses (Cucumber mosaic virus, Cherry leaf roll virus, strawberry latent ringspot virus, Arabis mosaic virus, Olive latent-1 virus and Olive latent-2 virus) which infect olive trees. Six compatible primer set for one-step RT-PCR amplification in a single closed-tube and 3' digoxigenin labelled probes were designed in optimal, specific and conserved regions. The method has been assessed with 195 Spanish field olive trees, suggesting that approximately 1.5% of the tested material was infected by Cucumber mosaic virus and 0.5% by Cherry leaf roll virus. This method saves time and reagent costs compared with monospecific RT-PCR which needs several reactions for the same number of tests. Using colourimetric detection, it is possible to analyse many samples, it increases sensitivity 10-fold, and whilst facilitating the interpretation of results, it avoids the use of gels and the toxic ethidium bromide. The method could be used routinely for sanitary and certification programmes.

摘要

开发了一种单步多重逆转录聚合酶链反应(RT-PCR),用于同时比色检测六种感染橄榄树的RNA病毒(黄瓜花叶病毒、樱桃叶卷曲病毒、草莓潜隐环斑病毒、南芥菜花叶病毒、油橄榄潜隐病毒1型和油橄榄潜隐病毒2型)。针对单管一步RT-PCR扩增设计了六组兼容引物,并在最佳、特异和保守区域设计了3'地高辛标记探针。该方法已对195棵西班牙田间橄榄树进行了评估,结果表明,约1.5%的测试材料感染了黄瓜花叶病毒,0.5%感染了樱桃叶卷曲病毒。与单特异性RT-PCR相比,该方法节省了时间和试剂成本,单特异性RT-PCR对相同数量的测试需要进行多次反应。使用比色检测,可以分析许多样品,灵敏度提高10倍,在便于结果解读的同时,避免了使用凝胶和有毒的溴化乙锭。该方法可常规用于卫生和认证计划。

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