• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

酵母Ty5逆转录转座子靶向沉默染色质是由整合酶与Sir4p之间的相互作用介导的。

Targeting of the yeast Ty5 retrotransposon to silent chromatin is mediated by interactions between integrase and Sir4p.

作者信息

Xie W, Gai X, Zhu Y, Zappulla D C, Sternglanz R, Voytas D F

机构信息

Department of Zoology and Genetics, Iowa State University, Ames, Iowa 50011-3260, USA.

出版信息

Mol Cell Biol. 2001 Oct;21(19):6606-14. doi: 10.1128/MCB.21.19.6606-6614.2001.

DOI:10.1128/MCB.21.19.6606-6614.2001
PMID:11533248
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC99806/
Abstract

The Ty5 retrotransposons of Saccharomyces cerevisiae integrate preferentially into regions of silent chromatin at the telomeres and silent mating loci (HMR and HML). We define a Ty5-encoded targeting domain that spans 6 amino acid residues near the C terminus of integrase (LXSSXP). The targeting domain establishes silent chromatin when it is tethered to a weakened HMR-E silencer, and it disrupts telomeric silencing when it is overexpressed. As determined by both yeast two-hybrid and in vitro binding assays, the targeting domain interacts with the C terminus of Sir4p, a structural component of silent chromatin. This interaction is abrogated by mutations in the targeting domain that disrupt integration into silent chromatin, suggesting that recognition of Sir4p by the targeting domain is the primary determinant in Ty5 target specificity.

摘要

酿酒酵母的Ty5逆转座子优先整合到端粒和沉默交配位点(HMR和HML)的沉默染色质区域。我们定义了一个Ty5编码的靶向结构域,它位于整合酶C末端附近的6个氨基酸残基处(LXSSXP)。当该靶向结构域与弱化的HMR - E沉默子相连时可建立沉默染色质,而当它过度表达时则会破坏端粒沉默。通过酵母双杂交和体外结合试验确定,该靶向结构域与Sir4p的C末端相互作用,Sir4p是沉默染色质的一种结构成分。靶向结构域中破坏整合到沉默染色质中的突变消除了这种相互作用,这表明靶向结构域对Sir4p的识别是Ty5靶标特异性的主要决定因素。

相似文献

1
Targeting of the yeast Ty5 retrotransposon to silent chromatin is mediated by interactions between integrase and Sir4p.酵母Ty5逆转录转座子靶向沉默染色质是由整合酶与Sir4p之间的相互作用介导的。
Mol Cell Biol. 2001 Oct;21(19):6606-14. doi: 10.1128/MCB.21.19.6606-6614.2001.
2
Tagging chromatin with retrotransposons: target specificity of the Saccharomyces Ty5 retrotransposon changes with the chromosomal localization of Sir3p and Sir4p.用逆转录转座子标记染色质:酿酒酵母Ty5逆转录转座子的靶标特异性随Sir3p和Sir4p的染色体定位而变化。
Genes Dev. 1999 Oct 15;13(20):2738-49. doi: 10.1101/gad.13.20.2738.
3
A single amino acid change in the yeast retrotransposon Ty5 abolishes targeting to silent chromatin.酵母逆转录转座子Ty5中的单个氨基酸变化会消除其对沉默染色质的靶向作用。
Mol Cell. 1998 Jun;1(7):1051-5. doi: 10.1016/s1097-2765(00)80105-7.
4
Targeting integration of the Saccharomyces Ty5 retrotransposon.靶向酿酒酵母Ty5逆转录转座子的整合
Methods Mol Biol. 2008;435:153-63. doi: 10.1007/978-1-59745-232-8_11.
5
Controlling integration specificity of a yeast retrotransposon.控制酵母逆转录转座子的整合特异性。
Proc Natl Acad Sci U S A. 2003 May 13;100(10):5891-5. doi: 10.1073/pnas.1036705100. Epub 2003 May 1.
6
cDNA of the yeast retrotransposon Ty5 preferentially recombines with substrates in silent chromatin.酵母逆转录转座子Ty5的互补DNA优先与沉默染色质中的底物发生重组。
Mol Cell Biol. 1999 Jan;19(1):484-94. doi: 10.1128/MCB.19.1.484.
7
Silent chromatin determines target preference of the Saccharomyces retrotransposon Ty5.沉默染色质决定酿酒酵母反转录转座子Ty5的靶标偏好性。
Proc Natl Acad Sci U S A. 1997 Jul 8;94(14):7412-6. doi: 10.1073/pnas.94.14.7412.
8
The Saccharomyces retrotransposon Ty5 integrates preferentially into regions of silent chromatin at the telomeres and mating loci.酿酒酵母反转录转座子Ty5优先整合到端粒和交配位点的沉默染色质区域。
Genes Dev. 1996 Mar 1;10(5):634-45. doi: 10.1101/gad.10.5.634.
9
Phosphorylation regulates integration of the yeast Ty5 retrotransposon into heterochromatin.磷酸化作用调控酵母Ty5逆转录转座子整合到异染色质中。
Mol Cell. 2007 Jul 20;27(2):289-299. doi: 10.1016/j.molcel.2007.06.010.
10
Multiple interactions in Sir protein recruitment by Rap1p at silencers and telomeres in yeast.酵母中Rap1p在沉默子和端粒处招募Sir蛋白的多种相互作用。
Mol Cell Biol. 2001 Dec;21(23):8082-94. doi: 10.1128/MCB.21.23.8082-8094.2001.

引用本文的文献

1
From parasites to partners: exploring the intricacies of host-transposon dynamics and coevolution.从寄生虫到伙伴:探索宿主转座子动态和共同进化的复杂性。
Funct Integr Genomics. 2023 Aug 23;23(3):278. doi: 10.1007/s10142-023-01206-w.
2
A proteomic screen of Ty1 integrase partners identifies the protein kinase CK2 as a regulator of Ty1 retrotransposition.对Ty1整合酶相互作用蛋白的蛋白质组学筛选确定蛋白激酶CK2是Ty1逆转录转座的一个调节因子。
Mob DNA. 2022 Nov 18;13(1):26. doi: 10.1186/s13100-022-00284-0.
3
A point mutation in HIV-1 integrase redirects proviral integration into centromeric repeats.HIV-1 整合酶的点突变将前病毒整合到着丝粒重复序列中。
Nat Commun. 2022 Mar 18;13(1):1474. doi: 10.1038/s41467-022-29097-8.
4
Constitutive Heterochromatin in Eukaryotic Genomes: A Mine of Transposable Elements.真核生物基因组中的组成性异染色质:转座元件的宝库。
Cells. 2022 Feb 22;11(5):761. doi: 10.3390/cells11050761.
5
Structural basis of Ty3 retrotransposon integration at RNA Polymerase III-transcribed genes.Ty3 逆转录转座子在 RNA 聚合酶 III 转录基因上整合的结构基础。
Nat Commun. 2021 Nov 30;12(1):6992. doi: 10.1038/s41467-021-27338-w.
6
Light and shadow on the mechanisms of integration site selection in yeast Ty retrotransposon families.酵母 Ty 反转录转座子家族整合位点选择机制中的光与影。
Curr Genet. 2021 Jun;67(3):347-357. doi: 10.1007/s00294-021-01154-7. Epub 2021 Feb 15.
7
Mutations altering acetylated residues in the CTD of HIV-1 integrase cause defects in proviral transcription at early times after integration of viral DNA.HIV-1 整合酶 CTD 中乙酰化残基的突变导致病毒 DNA 整合后早期前病毒转录缺陷。
PLoS Pathog. 2020 Dec 22;16(12):e1009147. doi: 10.1371/journal.ppat.1009147. eCollection 2020 Dec.
8
A Field Guide to Eukaryotic Transposable Elements.真核转座元件野外手册。
Annu Rev Genet. 2020 Nov 23;54:539-561. doi: 10.1146/annurev-genet-040620-022145. Epub 2020 Sep 21.
9
A small targeting domain in Ty1 integrase is sufficient to direct retrotransposon integration upstream of tRNA genes.Ty1 整合酶中的一个小靶向结构域足以指导逆转录转座子整合到 tRNA 基因的上游。
EMBO J. 2020 Sep 1;39(17):e104337. doi: 10.15252/embj.2019104337. Epub 2020 Jul 17.
10
Transposable elements employ distinct integration strategies with respect to transcriptional landscapes in eukaryotic genomes.转座元件在真核基因组的转录景观方面采用了不同的整合策略。
Nucleic Acids Res. 2020 Jul 9;48(12):6685-6698. doi: 10.1093/nar/gkaa370.

本文引用的文献

1
Expression and processing of proteins encoded by the Saccharomyces retrotransposon Ty5.酿酒酵母逆转录转座子Ty5编码蛋白的表达与加工
J Virol. 2001 Feb;75(4):1790-7. doi: 10.1128/JVI.75.4.1790-1797.2001.
2
The Brf and TATA-binding protein subunits of the RNA polymerase III transcription factor IIIB mediate position-specific integration of the gypsy-like element, Ty3.RNA聚合酶III转录因子IIIB的Brf和TATA结合蛋白亚基介导了类吉普赛元件Ty3的位置特异性整合。
J Biol Chem. 2000 Sep 22;275(38):29800-7. doi: 10.1074/jbc.M003149200.
3
A phylogenetically conserved NAD+-dependent protein deacetylase activity in the Sir2 protein family.Sir2蛋白家族中一种系统发育保守的NAD⁺依赖性蛋白脱乙酰酶活性。
Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6658-63. doi: 10.1073/pnas.97.12.6658.
4
Expression of an active form of recombinant Ty1 reverse transcriptase in Escherichia coli: a fusion protein containing the C-terminal region of the Ty1 integrase linked to the reverse transcriptase-RNase H domain exhibits polymerase and RNase H activities.重组Ty1逆转录酶活性形式在大肠杆菌中的表达:一种融合蛋白,其包含与逆转录酶-RNase H结构域相连的Ty1整合酶C末端区域,具有聚合酶和RNase H活性。
Biochem J. 2000 Jun 1;348 Pt 2(Pt 2):337-42.
5
The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylases.沉默蛋白SIR2及其同源物是依赖烟酰胺腺嘌呤二核苷酸的蛋白质脱乙酰酶。
Proc Natl Acad Sci U S A. 2000 May 23;97(11):5807-11. doi: 10.1073/pnas.110148297.
6
Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase.转录沉默与长寿蛋白Sir2是一种依赖烟酰胺腺嘌呤二核苷酸的组蛋白脱乙酰酶。
Nature. 2000 Feb 17;403(6771):795-800. doi: 10.1038/35001622.
7
Tagging chromatin with retrotransposons: target specificity of the Saccharomyces Ty5 retrotransposon changes with the chromosomal localization of Sir3p and Sir4p.用逆转录转座子标记染色质:酿酒酵母Ty5逆转录转座子的靶标特异性随Sir3p和Sir4p的染色体定位而变化。
Genes Dev. 1999 Oct 15;13(20):2738-49. doi: 10.1101/gad.13.20.2738.
8
Modular evolution of the integrase domain in the Ty3/Gypsy class of LTR retrotransposons.LTR逆转录转座子Ty3/Gypsy类中整合酶结构域的模块化进化。
J Virol. 1999 Jun;73(6):5186-90. doi: 10.1128/JVI.73.6.5186-5190.1999.
9
Polymorphisms and genomic organization of repetitive DNA from centromeric regions of Arabidopsis chromosomes.拟南芥染色体着丝粒区域重复DNA的多态性与基因组组织
Plant Cell. 1999 Jan;11(1):31-42. doi: 10.1105/tpc.11.1.31.
10
Functional characterization of the N terminus of Sir3p.Sir3p蛋白N端的功能特性
Mol Cell Biol. 1998 Oct;18(10):6110-20. doi: 10.1128/MCB.18.10.6110.