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使用新型“靶向捕获”模型系统对拟杆菌接合转座子进行分析。

Analysis of a Bacteroides conjugative transposon using a novel "targeted capture" model system.

作者信息

Smith C J, Parker A C, Bacic M

机构信息

Department of Microbiology and Immunology, East Carolina University, Greenville, North Carolina 27858-4354, USA.

出版信息

Plasmid. 2001 Jul;46(1):47-56. doi: 10.1006/plas.2001.1528.

DOI:10.1006/plas.2001.1528
PMID:11535035
Abstract

Large conjugative transposons (CTn's) are widespread among Bacteroides spp. and they are responsible for the high rates of Bacteroides tetracycline resistance, which is mediated by the tetQ gene. These elements are self-transmissible and conjugation can be induced up to 1000-fold by the addition of tetracycline to cultures prior to mating. In addition to self-transfer, the Bacteroides CTn's, such as CTn341, are able to mobilize unlinked genetic elements such as plasmids and mobilizable transposons in a tetracycline-inducible manner. To study the molecular properties of these unique elements, a vector was designed to capture CTn's for analysis in heterologous hosts. This plasmid, pFD670, consisted of the low-copy vector pWSK29, the RK2 oriT, an ermF gene, and a tetQ gene fragment containing the N-terminus and promoter. The vector was transferred into Bacteroides recipients containing CTn341 where it integrated into the tetQ gene by homologous recombination. This integrated construct then was transferred back into an Escherichia coli host where it replicated as a plasmid, pFD699, about 56 kb in size. Further analysis showed that pFD699 could be transferred into Bacteroides hosts where it displayed the same tetracycline-inducible properties as the native CTn341. The captured element appeared to utilize a circular intermediate in both transfer and transposition, and integration into the chromosome seemed to be random. Hybridization studies with a range of Bacteroides CTn's encoding tetracycline resistance revealed a great deal of homology between most of the CTn's but there was much variation seen in the restriction patterns of these elements, suggesting great diversity among this group.

摘要

大型接合转座子(CTn)在拟杆菌属中广泛存在,它们是拟杆菌对四环素产生高抗性的原因,这种抗性由tetQ基因介导。这些元件具有自我传递性,在交配前向培养物中添加四环素可使接合频率提高至1000倍。除了自我转移外,拟杆菌CTn,如CTn341,能够以四环素诱导的方式动员不相连的遗传元件,如质粒和可移动转座子。为了研究这些独特元件的分子特性,设计了一种载体来捕获CTn以便在异源宿主中进行分析。该质粒pFD670由低拷贝载体pWSK29、RK2 oriT、ermF基因和一个包含N端及启动子的tetQ基因片段组成。该载体被转入含有CTn341的拟杆菌受体中,通过同源重组整合到tetQ基因中。然后将这种整合构建体转回大肠杆菌宿主中,它作为大小约为56 kb的质粒pFD699进行复制。进一步分析表明,pFD699可以转入拟杆菌宿主中,并且表现出与天然CTn341相同的四环素诱导特性。捕获的元件在转移和转座过程中似乎都利用了环状中间体,并且整合到染色体中似乎是随机的。对一系列编码四环素抗性的拟杆菌CTn进行杂交研究发现,大多数CTn之间存在大量同源性,但这些元件的限制图谱存在很大差异,表明该类群具有很大的多样性。

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