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一项关于含有五原子酰胺主链的化学修饰寡脱氧核苷酸的研究,该寡脱氧核苷酸对RNA的结合能力有所提高。

Studies of a chemically modified oligodeoxynucleotide containing a 5-atom amide backbone which exhibits improved binding to RNA.

作者信息

Wilds C J, Minasov G, Natt F, von Matt P, Altmann K H, Egli M

机构信息

Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, USA.

出版信息

Nucleosides Nucleotides Nucleic Acids. 2001 Apr-Jul;20(4-7):991-4. doi: 10.1081/NCN-100002475.

DOI:10.1081/NCN-100002475
PMID:11563161
Abstract

Chimeric oligodeoxyribonucleotides where the phosphodiester linkage -C3'-O-PO2--O-CH2-C4'- of DNA is substituted by the amide linkage -C3'-CH2-CH*(CH3)-CO-NH-CH2-C4' (*either R or S stereochemistry) have been prepared and their binding to RNA targets have been investigated. Incorporation of a single amide unit increases the Tm by approximately 1.4-1.9 degrees C. Circular dichroic spectra of these modified duplexes are similar to the wildtype DNA/RNA.

摘要

已制备出嵌合寡脱氧核糖核苷酸,其中DNA的磷酸二酯键-C3'-O-PO2--O-CH2-C4'被酰胺键-C3'-CH2-CH*(CH3)-CO-NH-CH2-C4'(*为R或S立体化学结构)取代,并对其与RNA靶标的结合进行了研究。单个酰胺单元的掺入使解链温度(Tm)提高了约1.4 - 1.9摄氏度。这些修饰双链体的圆二色光谱与野生型DNA/RNA相似。

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