相似文献
1
The structure of an AspRS-tRNA(Asp) complex reveals a tRNA-dependent control mechanism.
EMBO J. 2001 Sep 17;20(18):5290-301. doi: 10.1093/emboj/20.18.5290.
2
Yeast aspartyl-tRNA synthetase residues interacting with tRNA(Asp) identity bases connectively contribute to tRNA(Asp) binding in the ground and transition-state complex and discriminate against non-cognate tRNAs.
J Mol Biol. 1999 Aug 27;291(4):761-73. doi: 10.1006/jmbi.1999.3012.
3
Synthesis of aspartyl-tRNA(Asp) in Escherichia coli--a snapshot of the second step.
EMBO J. 1999 Nov 15;18(22):6532-41. doi: 10.1093/emboj/18.22.6532.
4
The free yeast aspartyl-tRNA synthetase differs from the tRNA(Asp)-complexed enzyme by structural changes in the catalytic site, hinge region, and anticodon-binding domain.
J Mol Biol. 2000 Jun 23;299(5):1313-24. doi: 10.1006/jmbi.2000.3791.
5
Crystal structure of the N-terminal anticodon-binding domain of the nondiscriminating aspartyl-tRNA synthetase from Helicobacter pylori.
Acta Crystallogr F Struct Biol Commun. 2017 Feb 1;73(Pt 2):62-69. doi: 10.1107/S2053230X16020586. Epub 2017 Jan 19.
6
Recognition of acceptor-stem structure of tRNA(Asp) by Escherichia coli aspartyl-tRNA synthetase.
RNA. 2003 Apr;9(4):386-93. doi: 10.1261/rna.2139703.
7
An intermediate step in the recognition of tRNA(Asp) by aspartyl-tRNA synthetase.
J Mol Biol. 2000 Jun 16;299(4):1051-60. doi: 10.1006/jmbi.2000.3819.
8
Yeast tRNA(Asp) recognition by its cognate class II aminoacyl-tRNA synthetase.
Nature. 1993 Mar 11;362(6416):181-4. doi: 10.1038/362181a0.
9
Anticodon-binding domain swapping in a nondiscriminating aspartyl-tRNA synthetase reveals contributions to tRNA specificity and catalytic activity.
Proteins. 2020 Sep;88(9):1133-1142. doi: 10.1002/prot.25881. Epub 2020 Feb 24.
10
Construction of an Escherichia coli knockout strain for functional analysis of tRNA(Asp).
J Mol Biol. 2001 Jul 13;310(3):537-42. doi: 10.1006/jmbi.2001.4785.
引用本文的文献
1
Mitochondrial RNA in Inflammation.
Int J Biol Sci. 2025 Aug 22;21(12):5378-5392. doi: 10.7150/ijbs.119841. eCollection 2025.
2
Natural product-mediated reaction hijacking mechanism validates Plasmodium aspartyl-tRNA synthetase as an antimalarial drug target.
PLoS Pathog. 2025 Jul 8;21(7):e1013057. doi: 10.1371/journal.ppat.1013057. eCollection 2025 Jul.
3
Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase.
Nat Commun. 2024 Jan 31;15(1):937. doi: 10.1038/s41467-024-45224-z.
4
The tRNA identity landscape for aminoacylation and beyond.
Nucleic Acids Res. 2023 Feb 28;51(4):1528-1570. doi: 10.1093/nar/gkad007.
5
Structure and Dynamics of the Human Multi-tRNA Synthetase Complex.
Subcell Biochem. 2022;99:199-233. doi: 10.1007/978-3-031-00793-4_6.
6
Mycobacterium tuberculosis Phe-tRNA synthetase: structural insights into tRNA recognition and aminoacylation.
Nucleic Acids Res. 2021 May 21;49(9):5351-5368. doi: 10.1093/nar/gkab272.
7
Drugging tRNA aminoacylation.
RNA Biol. 2018;15(4-5):667-677. doi: 10.1080/15476286.2018.1429879. Epub 2018 Feb 2.
8
Discovery and Characterization of Chemical Compounds That Inhibit the Function of Aspartyl-tRNA Synthetase from Pseudomonas aeruginosa.
SLAS Discov. 2018 Mar;23(3):294-301. doi: 10.1177/2472555217744559. Epub 2017 Nov 29.
9
Aminoacyl-tRNA Synthetases in the Bacterial World.
EcoSal Plus. 2016 May;7(1). doi: 10.1128/ecosalplus.ESP-0002-2016.
10
An atlas of RNA base pairs involving modified nucleobases with optimal geometries and accurate energies.
Nucleic Acids Res. 2015 Aug 18;43(14):6714-29. doi: 10.1093/nar/gkv606. Epub 2015 Jun 27.
本文引用的文献
1
Crystallization of Escherichia coli aspartyl-tRNA synthetase in its free state and in a complex with yeast tRNA(Asp).
Acta Crystallogr D Biol Crystallogr. 1996 Jan 1;52(Pt 1):211-4. doi: 10.1107/S090744499500727X.
2
The CCP4 suite: programs for protein crystallography.
Acta Crystallogr D Biol Crystallogr. 1994 Sep 1;50(Pt 5):760-3. doi: 10.1107/S0907444994003112.
3
Plasmid systems to study RNA function in Escherichia coli.
J Mol Biol. 2001 Jul 13;310(3):543-8. doi: 10.1006/jmbi.2001.4786.
4
Construction of an Escherichia coli knockout strain for functional analysis of tRNA(Asp).
J Mol Biol. 2001 Jul 13;310(3):537-42. doi: 10.1006/jmbi.2001.4785.
5
The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems.
EMBO Rep. 2000 Jul;1(1):18-23. doi: 10.1093/embo-reports/kvd001.
6
An intermediate step in the recognition of tRNA(Asp) by aspartyl-tRNA synthetase.
J Mol Biol. 2000 Jun 16;299(4):1051-60. doi: 10.1006/jmbi.2000.3819.
7
Synthesis of aspartyl-tRNA(Asp) in Escherichia coli--a snapshot of the second step.
EMBO J. 1999 Nov 15;18(22):6532-41. doi: 10.1093/emboj/18.22.6532.
8
Correlation of deformability at a tRNA recognition site and aminoacylation specificity.
Proc Natl Acad Sci U S A. 1999 Oct 12;96(21):11764-9. doi: 10.1073/pnas.96.21.11764.
9
Crystallography & NMR system: A new software suite for macromolecular structure determination.
Acta Crystallogr D Biol Crystallogr. 1998 Sep 1;54(Pt 5):905-21. doi: 10.1107/s0907444998003254.
10
Crystal structure of aspartyl-tRNA synthetase from Pyrococcus kodakaraensis KOD: archaeon specificity and catalytic mechanism of adenylate formation.
EMBO J. 1998 Sep 1;17(17):5227-37. doi: 10.1093/emboj/17.17.5227.
Zotero 插件