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鸟苷 5'-三磷酸(GTP4-)和肌苷 5'-三磷酸(ITP4-)的单体金属离子络合物溶液中的稳定性和异构平衡,与腺苷 5'-三磷酸(ATP4-)的稳定性和异构平衡的比较。

Stabilities and isomeric equilibria in solutions of monomeric metal-ion complexes of guanosine 5'-triphosphate (GTP4-) and inosine 5'-triphosphate (ITP4-) in comparison with those of adenosine 5'-triphosphate (ATP4-).

作者信息

Sigel H, Bianchi E M, Corfù N A, Kinjo Y, Tribolet R, Martin R B

机构信息

Institut für Anorganische Chemie, Universität Basel, Switzerland.

出版信息

Chemistry. 2001 Sep 3;7(17):3729-37. doi: 10.1002/1521-3765(20010903)7:17<3729::aid-chem3729>3.0.co;2-e.

Abstract

Under experimental conditions in which the self-association of the purine-nucleoside 5'-triphosphates (PuNTPs) GTP and ITP is negligible, potentiometric pH titrations were carried out to determine the stabilities of the M(H;PuNTP) and M(PuNTP)2-complexes where M2+ = Mg2+, Ca2+, Sr2+. Ba2+, Mn2+, Co2+, Ni2+, Cu2+, Zn2+, or Cd2+ (I = 0.1 M, 25 degrees C). The stabilities of all M(GTP)2- and M(ITP)2- complexes are significantly larger than those of the corresponding complexes formed with pyrimidine-nucleoside 5'-triphosphates (PyNTPs), which had been determined previously under the same conditions. This increased complex stability is attributed, in agreement with previous 1H MNR shift studies, to the formation of macrochelates of the phosphate-coordinated metal ions with N7 of the purine residues. A similar enhanced stability (despite relatively large error limits) was observed for the M(H;PuNTP) complexes, in which H+ is bound to the terminal y-phosphate group, relative to the stability of the M(H;PyNTP)- species. The percentage of the macrochelated isomers in the M(GTP)2- and M(ITP)2- systems was quantified by employing the difference log KMM(PuNTP)-log KMM(PyNTP); the lowest and highest formation degrees of the macrochelates were observed for Mg(ITP)2- and Cu(GTP)2- with 17 +/- 11% and 97 +/- 1%, respectively. From previous studies of M(ATP)2- complexes, it is known that innersphere and outersphere macrochelates may form; that is, in the latter case a water molecule is between N7 and the phosphate-coordinated M2+. Similar conclusions are reached now by comparisons with earlier 1H MNR shift measurements, that is, that Mg(GTP)2- (21 +/- 11%), for example, exists largely in the form of an outersphere macrochelate and Zn(GTP)2- (68 +/- 4%) as an innersphere one. Generally, the overall percentage of macrochelate falls off for a given metal ion in the order M(GTP)2- > M(ITP)2- > M(ATP)2-; this is in accord with the decreasing basicity of N7 and the steric inhibition of the (C6)NH2 group in the adenine residue. Furthermore, although the absolute stability constants of the previously studied M(GMP), M(IMP), and M(AMP) complexes differ by about two to three log units from the present M(PuNTP)2- results, the formation degrees of the macrochelates are astonishingly similar for the two series of nucleotides for a given metal ion and purine-nucleobase residue. The conclusion that N7 of the guanine residue is an especially favored binding site for metal ions is also in accord with observations made for nucleic acids.

摘要

在嘌呤核苷5'-三磷酸(PuNTPs)鸟苷三磷酸(GTP)和肌苷三磷酸(ITP)的自缔合可忽略不计的实验条件下,进行电位pH滴定以测定M(H;PuNTP)和M(PuNTP)₂配合物的稳定性,其中M²⁺ = Mg²⁺、Ca²⁺、Sr²⁺、Ba²⁺、Mn²⁺、Co²⁺、Ni²⁺、Cu²⁺、Zn²⁺或Cd²⁺(I = 0.1 M,25℃)。所有M(GTP)₂和M(ITP)₂配合物的稳定性明显高于先前在相同条件下测定的与嘧啶核苷5'-三磷酸(PyNTPs)形成的相应配合物。与先前的¹H NMR位移研究一致,这种配合物稳定性的增加归因于磷酸根配位的金属离子与嘌呤残基的N7形成大环螯合物。对于M(H;PuNTP)配合物,其中H⁺与末端γ-磷酸基团结合,相对于M(H;PyNTP)⁻物种的稳定性,也观察到类似的稳定性增强(尽管误差范围相对较大)。通过采用log Kₘₘ(PuNTP) - log Kₘₘ(PyNTP)的差值来量化M(GTP)₂和M(ITP)₂体系中大环螯合异构体的百分比;Mg(ITP)₂和Cu(GTP)₂的大环螯合物形成度最低和最高,分别为(17 ± 11)%和(97 ± 1)%。从先前对M(ATP)₂配合物的研究可知,可能形成内界和外界大环螯合物;也就是说,在后一种情况下,水分子位于N7和磷酸根配位的M²⁺之间。现在通过与早期的¹H NMR位移测量结果进行比较也得出了类似的结论,例如,Mg(GTP)₂((21 ± 11)%)主要以外界大环螯合物的形式存在,而Zn(GTP)₂((68 ± 4)%)以内界大环螯合物的形式存在。一般来说,对于给定的金属离子,大环螯合物的总体百分比按M(GTP)₂ > M(ITP)₂ > M(ATP)₂的顺序下降;这与N7碱性的降低以及腺嘌呤残基中(C6)NH₂基团的空间位阻抑制作用一致。此外,尽管先前研究的M(GMP)、M(IMP)和M(AMP)配合物的绝对稳定常数与目前的M(PuNTP)₂结果相差约两到三个对数单位,但对于给定的金属离子和嘌呤碱基残基,这两个系列核苷酸的大环螯合物形成度惊人地相似。鸟嘌呤残基的N7是金属离子特别有利的结合位点这一结论也与对核酸的观察结果一致。

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