Song Xing-Zhi, Jentzen Walter, Jaquinod Laurent, Khoury Richard G., Medforth Craig J., Jia Song-Ling, Ma Jian-Guo, Smith Kevin M., Shelnutt John A.
Materials Theory and Computation Department, Sandia National Laboratories, Albuquerque, New Mexico 87185-1349, Department of Chemistry, University of New Mexico, Albuquerque, New Mexico 87131, Klinik und Poliklinik für Nuklearmedizin, Universität GH Essen, Hufelandstrasse 55, D-45147 Essen, Germany, and Department of Chemistry, University of California, Davis, California 95616.
Inorg Chem. 1998 May 4;37(9):2117-2128. doi: 10.1021/ic9711978.
The out-of-plane and in-plane distortions of a series of nickel(II) meso-substituted porphyrins with 0, 1, 2, or 4 tert-butyl groups [nickel(II) porphine (NiP), nickel(II) mono-tert-butylporphyrin (NiMtBuP), nickel(II) di-tert-butylporphyrin (NiDtBuP), and nickel(II) tetra-tert-butylporphyrin (NiTtBuP)] are investigated using molecular mechanics (MM) calculations, X-ray crystallography, UV-visible absorption spectroscopy, and resonance Raman spectroscopy. MM calculations are used to predict the stable conformations for this series of porphyrins. The out-of-plane distortions are then analyzed in terms of displacements along the normal coordinates of the porphyrin macrocycle using a new normal-coordinate structural decomposition method. As expected, the distortions are found to occur primarily along the lowest-frequency normal coordinate of each symmetry type and the distortions could be adequately simulated using only the lowest-frequency normal coordinates as a basis (the minimal basis). However, the distortions could be simulated significantly more accurately by extending the minimal basis by including the second-lowest-frequency normal coordinate of all symmetries. Using the extended basis is most important for the in-plane distortions. Detailed analysis of the types of distortion revealed that both the out-of-plane and the in-plane distortions depend on the perturbation symmetry of the peripheral substituents. The symmetry primarily depends on the pattern of substitution (number and positions of substituents) and the orientations of substituents. Often the perturbation symmetry can be predicted for a given porphyrin simply from the possible orientations of the substituents. Then, the main type(s) of symmetric deformation occurring for each possible molecular symmetry can be readily predicted from a D(4)(h)() correlation table. The stable conformers predicted by MM for the series of tert-butyl-substituted porphyrins confirm this simple but informative approach. Experimental verification of the calculated contributions of the symmetric deformations is provided by normal-coordinate structural decomposition of the available X-ray crystal structures of NiP, NiMtBuP, and NiDtBuP. The solid-state results are also supported by the resonance Raman and UV-visible absorption spectroscopic characterization of the porphyrins in solutions. The X-ray crystal structure of NiMtBuP is reported here for the first time.
利用分子力学(MM)计算、X射线晶体学、紫外可见吸收光谱和共振拉曼光谱,研究了一系列分别含有0、1、2或4个叔丁基的中位取代镍(II)卟啉[镍(II)卟吩(NiP)、镍(II)单叔丁基卟啉(NiMtBuP)、镍(II)二叔丁基卟啉(NiDtBuP)和镍(II)四叔丁基卟啉(NiTtBuP)]的面外和面内畸变。MM计算用于预测该系列卟啉的稳定构象。然后,使用一种新的正规坐标结构分解方法,根据沿卟啉大环正规坐标的位移来分析面外畸变。正如预期的那样,发现畸变主要沿着每种对称类型的最低频率正规坐标发生,并且仅以最低频率正规坐标为基础(最小基)就可以充分模拟畸变。然而,通过包括所有对称类型的第二低频率正规坐标来扩展最小基,可以更准确地模拟畸变。对于面内畸变,使用扩展基最为重要。对畸变类型的详细分析表明,面外和面内畸变均取决于外围取代基的微扰对称性。对称性主要取决于取代模式(取代基的数量和位置)以及取代基的取向。通常,对于给定的卟啉,仅从取代基的可能取向就可以预测微扰对称性。然后,根据D(4)(h)()相关表,可以很容易地预测每种可能分子对称性发生的主要对称变形类型。MM预测的叔丁基取代卟啉系列的稳定构象证实了这种简单但信息丰富的方法。通过对NiP、NiMtBuP和NiDtBuP的现有X射线晶体结构进行正规坐标结构分解,提供了对称变形计算贡献的实验验证。卟啉在溶液中的共振拉曼和紫外可见吸收光谱表征也支持了固态结果。本文首次报道了NiMtBuP的X射线晶体结构。