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[核酸及其组分的光学性质与分子结构。X. 不同含水量和质子化程度的变性DNA的红外光谱与分子结构]

[Optical properties and molecular structure of nucleic acids and their components. X. Infrared spectra and molecular structure of denatured DNA with different water content and degree of protonation].

作者信息

Sukhorukov B I, Kozlova L A, Shabarchina L I

出版信息

Biofizika. 1975 May-Jun;20(3):360-5.

PMID:1169986
Abstract

IR-spectra (4000-900 cm-minus-1) of heat denatured DNA (d-DNA) of calf thymus have been obtained in the range of relative humidity of 0-93% and of the guota of protoned bases alpha of 0-0,5. fron these spectra the diagram of d-DNA states is plotted as the relationships of intensities and the location of some bands with and relative humidity. At alpha approximately 0,2 a compact structure S2-1 with firm hydrogen bonds between protoned and unprotoned bases which is similar to those observed earlier while protoning homopolynucleotides poly-A and poly-C. At G1'-large values of alpha S2-1-conformation destroyed and a loose structure (alpha approximately 0,35) appears. the latter is characterized by a minimum H-binding of the base and increased hydration. Further increase of alpha brings about the formation of sufficiently compact G2-1-STRUCTURE WHICH IS CHARACTERIZED BY SOLID H-bonds between PO2-groups and protoned bases. A specific effect of the structures found on the state of absorbed water and the structure of hydrate envelope is revealed.

摘要

已在0 - 93%的相对湿度和0 - 0.5的质子化碱基α配额范围内获得了小牛胸腺热变性DNA(d - DNA)的红外光谱(4000 - 900厘米负一次方)。根据这些光谱,绘制了d - DNA状态图,显示为一些谱带的强度与位置和相对湿度之间的关系。在α约为0.2时,形成一种紧密结构S2 - 1,质子化和未质子化碱基之间存在牢固的氢键,这与早期质子化同聚核苷酸聚A和聚C时观察到的结构相似。在α值较大时(G1'),S2 - 1构象被破坏,出现一种松散结构(α约为0.35)。后者的特征是碱基的氢键结合最少且水化作用增强。α的进一步增加导致形成足够紧密的G2 - 1结构,其特征是PO2 - 基团与质子化碱基之间存在牢固的氢键。揭示了所发现的结构对吸收水的状态和水合物包膜结构的特定影响。

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