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介导早期作用的3.9 kb鸡溶菌酶增强子元件发育调控的因子鉴定。

Identification of factors mediating the developmental regulation of the early acting -3.9 kb chicken lysozyme enhancer element.

作者信息

Lefevre P, Kontaraki J, Bonifer C

机构信息

Molecular Medicine Unit, University of Leeds, St James's University Hospital, Clinical Sciences Building, Leeds LS9 7TF, UK.

出版信息

Nucleic Acids Res. 2001 Nov 15;29(22):4551-60. doi: 10.1093/nar/29.22.4551.

DOI:10.1093/nar/29.22.4551
PMID:11713304
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC92539/
Abstract

The chicken lysozyme gene -3.9 kb enhancer forms a DNase I hypersensitive site (DHS) early in macrophage differentiation, but not in more primitive multipotent myeloid precursor cells. A nucleosome becomes precisely positioned across the enhancer in parallel with DHS formation. In transfection assays, the 5'-part of the -3.9 kb element has ubiquitous enhancer activity. The 3'-part has no stimulatory activity, but is necessary for enhancer repression in lysozyme non-expressing cells. Recent studies have shown that the chromatin fine structure of this region is affected by inhibition of histone deacetylase activity after Trichostatin A (TSA) treatment, but only in lysozyme non-expressing cells. These results indicated a developmental modification of chromatin structure from a dynamic, but inactive, to a stabilised, possibly hyperacetylated, active state. Here we have identified positively and negatively acting transcription factors binding to the -3.9 kb enhancer and determined their contribution to enhancer activity. Furthermore, we examined the influence of TSA treatment on enhancer activity in macrophage cells and lysozyme non-expressing cells, including multipotent macrophage precursors. Interestingly, TSA treatment was able to restore enhancer activity fully in macrophage precursor cells, but not in non-macrophage lineage cells. These results suggest (i) that the transcription factor complement of multipotent progenitor cells is similar to that of lysozyme-expressing cells and (ii) that developmental regulation of the -3.9 kb enhancer is mediated by the interplay of repressing and activating factors that respond to or initiate changes in the chromatin acetylation state.

摘要

鸡溶菌酶基因-3.9 kb增强子在巨噬细胞分化早期形成一个核酸酶I超敏位点(DHS),但在更原始的多能髓系前体细胞中则不会形成。在DHS形成的同时,一个核小体精确地定位在增强子上。在转染实验中,-3.9 kb元件的5'部分具有普遍的增强子活性。3'部分没有刺激活性,但对于溶菌酶非表达细胞中的增强子抑制是必需的。最近的研究表明,该区域的染色质精细结构在曲古抑菌素A(TSA)处理后受到组蛋白去乙酰化酶活性抑制的影响,但仅在溶菌酶非表达细胞中如此。这些结果表明染色质结构发生了从动态但无活性状态到稳定的、可能是高度乙酰化的活性状态的发育性修饰。在这里,我们鉴定了与-3.9 kb增强子结合的正负作用转录因子,并确定了它们对增强子活性的贡献。此外,我们研究了TSA处理对巨噬细胞和溶菌酶非表达细胞(包括多能巨噬细胞前体)中增强子活性的影响。有趣的是,TSA处理能够在巨噬细胞前体细胞中完全恢复增强子活性,但在非巨噬细胞谱系细胞中则不能。这些结果表明:(i)多能祖细胞的转录因子组成与溶菌酶表达细胞的相似;(ii)-3.9 kb增强子的发育调控是由响应或引发染色质乙酰化状态变化的抑制和激活因子之间的相互作用介导的。

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本文引用的文献

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Chromatin fine structure profiles for a developmentally regulated gene: reorganization of the lysozyme locus before trans-activator binding and gene expression.一个发育调控基因的染色质精细结构图谱:溶菌酶基因座在反式激活因子结合和基因表达之前的重组。
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An early developmental transcription factor complex that is more stable on nucleosome core particles than on free DNA.一种早期发育转录因子复合物,其在核小体核心颗粒上比在游离DNA上更稳定。
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A C/EBP beta isoform recruits the SWI/SNF complex to activate myeloid genes.一种C/EBPβ异构体招募SWI/SNF复合物以激活髓系基因。
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Differential activity of the -2.7 kb chicken lysozyme enhancer in macrophages of different ontogenic origins is regulated by C/EBP and PU.1 transcription factors.
DNA Cell Biol. 1999 Aug;18(8):631-42. doi: 10.1089/104454999315042.
9
The -3.9 kb DNaseI hypersensitive site of the chicken lysozyme locus harbours an enhancer with unusual chromatin reorganizing activity.鸡溶菌酶基因座的-3.9 kb DNaseI超敏感位点含有一个具有异常染色质重组活性的增强子。
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