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在电子顺磁共振(EPR)可检测状态下研究的来自嗜酒色杆菌的[NiFe]氢化酶:氢/氘交换实验为活性位点结构提供了新信息。

The [NiFe] hydrogenase from Allochromatium vinosum studied in EPR-detectable states: H/D exchange experiments that yield new information about the structure of the active site.

作者信息

Bleijlevens B, Faber B W, Albracht S P

机构信息

Swammerdam Institute for Life Sciences, Biochemistry, University of Amsterdam, Plantage Muidergracht 12, 1018 TV Amsterdam, The Netherlands.

出版信息

J Biol Inorg Chem. 2001 Oct;6(8):763-9. doi: 10.1007/s007750100252.

DOI:10.1007/s007750100252
PMID:11713683
Abstract

In this study we report on thus-far unobserved proton hyperfine couplings in the well-known EPR signals of [NiFe] hydrogenases. The preparation of the enzyme in several highly homogeneous states allowed us to carefully re-examine the Ni(u), Ni(r), Ni(a)-C* and Ni(a)-L* EPR signals which are present in most [NiFe] hydrogenases. At high resolution (modulation amplitude 0.57 G), clear indications for hyperfine interactions were observed in the g(z) line of the Ni(r)* EPR signal. The hyperfine pattern became more pronounced in 2H2O. Simulations of the spectra suggested the interaction of the Ni-based unpaired electron with two equivalent, non-exchangeable protons (A1,2=13.2 MHz) and one exchangeable proton (A3=6.6 MHz) in the Ni(r)* state. Interaction with an exchangeable proton could not be observed in the Ni(u)* EPR signal. The identity of the three protons is discussed and correlated to available ENDOR data. It is concluded that the NiFe centre in the Ni(r)* state contains a hydroxide ligand bound to the nickel, which is pointing towards the gas channel rather than to iron.

摘要

在本研究中,我们报告了在[NiFe]氢化酶著名的电子顺磁共振(EPR)信号中迄今未观察到的质子超精细耦合。将该酶制备成几种高度均一的状态,使我们能够仔细重新检查大多数[NiFe]氢化酶中存在的Ni(u)、Ni(r)、Ni(a)-C和Ni(a)-L EPR信号。在高分辨率(调制幅度0.57 G)下,在Ni(r)* EPR信号的g(z)线中观察到了超精细相互作用的明确迹象。在2H2O中,超精细模式变得更加明显。光谱模拟表明,在Ni(r)状态下,基于镍的未成对电子与两个等效的、不可交换的质子(A1,2 = 13.2 MHz)和一个可交换的质子(A3 = 6.6 MHz)相互作用。在Ni(u) EPR信号中未观察到与可交换质子的相互作用。讨论了这三个质子的身份,并将其与可用的电子核双共振(ENDOR)数据相关联。得出的结论是,Ni(r)*状态下的NiFe中心包含一个与镍结合的氢氧根配体,该配体指向气体通道而非铁。

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