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SEDL的结晶及初步X射线晶体学分析

Crystallization and preliminary X-ray crystallographic analysis of SEDL.

作者信息

Jang Se Bok, Cho Yong-Soon, Eom Soo-Jung, Choi Eui-Ju, Kim Kyung-Hwa, Suh Pann-Ghill, Oh Byung-Ha

机构信息

National Creative Research Initiative Center for Biomolecular Recognition and Department of Life Science, Pohang University of Science and Technology, Pohang, Kyungbuk 790-784, South Korea.

出版信息

Acta Crystallogr D Biol Crystallogr. 2002 Mar;58(Pt 3):564-6. doi: 10.1107/s0907444902001403. Epub 2002 Feb 21.

Abstract

SEDL (known also as sedlin) is a 140 amino-acid protein with a putative role in endoplasmic reticulum-to-Golgi transport. Several missense mutations and deletion mutations in the SEDL gene, which result in protein truncation by frame shift, are responsible for spondyloepiphyseal dysplasia tarda, a progressive skeletal disorder. The protein is identical to MIP-2A, which was shown to interact physically with c-myc promotor-binding protein 1 (MBP-1) and relieve the regulatory role of MBP-1 as a general transcription repressor. In order to gain insights into the function of SEDL by structural analysis, the protein was overexpressed and crystallized as a first step. SEDL was overexpressed in Escherichia coli and crystallized using the hanging-drop vapour-diffusion method at 298 K. The crystals belong to the orthorhombic space group C222(1), with unit-cell parameters a = 46.69, b = 101.30, c = 66.15 A. The unit cell is likely to contain one molecule of SEDL, with a crystal volume per protein mass (V(M)) of 2.36 A(3)Da(-1) and a solvent content of about 47.9% by volume. A native data set to 2.8 A resolution was obtained from a flash-cooled crystal using synchrotron radiation.

摘要

SEDL(也称为sedlin)是一种由140个氨基酸组成的蛋白质,在内质网到高尔基体的运输过程中可能发挥作用。SEDL基因中的几个错义突变和缺失突变会导致移码引起的蛋白质截短,这些突变是迟发性脊椎骨骺发育不良的病因,这是一种进行性骨骼疾病。该蛋白质与MIP-2A相同,已证明MIP-2A与c-myc启动子结合蛋白1(MBP-1)发生物理相互作用,并解除MBP-1作为一般转录抑制因子的调节作用。为了通过结构分析深入了解SEDL的功能,首先对该蛋白质进行了过表达和结晶。SEDL在大肠杆菌中过表达,并在298K下使用悬滴气相扩散法结晶。晶体属于正交空间群C222(1),晶胞参数a = 46.69,b = 101.30,c = 66.15 Å。晶胞可能包含一个SEDL分子,每蛋白质质量的晶体体积(V(M))为2.36 ųDa⁻¹,溶剂含量约为47.9%(体积)。使用同步辐射从快速冷却的晶体中获得了分辨率为2.8 Å的天然数据集。

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