Pfaffl M W, Georgieva T Mircheva, Georgiev I Penchev, Ontsouka E, Hageleit M, Blum J W
Institute of Physiology, Center of Life and Food Sciences, Technical University of Munich, 85354 Freising-Weihenstephan, Germany.
Domest Anim Endocrinol. 2002 Apr;22(2):91-102. doi: 10.1016/s0739-7240(01)00128-x.
Reverse transcription (RT) followed by polymerase chain reaction (PCR) is the technique of choice for analysing mRNA in extremely low abundance. Real-time RT-PCR using SYBR Green I detection combines the ease and necessary exactness to be able to produce reliable as well as rapid results. To obtain highly accurate and reliable results in a real-time RT-PCR a highly defined calibration curve is needed. We designed and developed nine different calibration curves, based on recombinant DNA plasmid standards and established them on a constant real-time PCR platform for the following factors: growth hormone receptor (GHR), insulin-like growth factor (IGF)-1, IGF-1 receptor (IGF-1R), IGF-2, IGF-2 receptor (IGF-2R), insulin receptor (INSR), and IGF-binding proteins (IGF-BP) 1, 2 and 3. Developed assays were applied in the LightCycler system on bovine ileum and liver total RNA and showed high specificity and sensitivity of quantification. All assays had a detection limit of under 35 recombinant DNA molecules present in the capillary. The SYBR Green I determination resulted in a reliable and accurate quantification with high test linearity (Pearson correlation coefficient r > 0.99) over seven orders of magnitude from <10(2) to >10(8) recombinant DNA start molecules and an assay variation of maximal 5.3%. Applicability of the method was shown by analysing mRNA levels in newborn calves: mRNA concentrations per gram tissue of mRNAs of IGF-1, IGF-1R, IGF-2, IGF-2R, GHR, INSR, and IGF-BP1, 2 and 3 were all different between in liver and ileum and the traits all exhibited individual differences.
逆转录(RT)后进行聚合酶链反应(PCR)是分析极低丰度mRNA的首选技术。使用SYBR Green I检测的实时RT-PCR结合了简便性和必要的精确性,能够产生可靠且快速的结果。为了在实时RT-PCR中获得高度准确和可靠的结果,需要一条高度明确的校准曲线。我们基于重组DNA质粒标准设计并开发了九条不同的校准曲线,并在一个恒定的实时PCR平台上针对以下因素建立了这些曲线:生长激素受体(GHR)、胰岛素样生长因子(IGF)-1、IGF-1受体(IGF-1R)、IGF-2、IGF-2受体(IGF-2R)、胰岛素受体(INSR)以及IGF结合蛋白(IGF-BP)1、2和3。所开发的检测方法应用于LightCycler系统对牛回肠和肝脏总RNA进行检测,显示出高特异性和定量灵敏度。所有检测方法在毛细管中存在的重组DNA分子低于35个时均具有检测限。SYBR Green I测定法在从<10(2)到>10(8)个重组DNA起始分子的七个数量级范围内产生了可靠且准确的定量结果,具有高测试线性(皮尔逊相关系数r>0.99),且检测变异最大为5.3%。通过分析新生犊牛的mRNA水平证明了该方法的适用性:肝脏和回肠中IGF-1、IGF-1R、IGF-2、IGF-2R、GHR、INSR以及IGF-BP1、2和3的mRNA每克组织的浓度均不同,并且这些性状均表现出个体差异。