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比较染色体描绘显示小熊猫(小熊猫属)具有高度保守的核型。

[Comparative chromosome painting shows the red panda (Ailurus fulgens) has a highly conserved karyotype].

作者信息

Tian Ying, Nie Wen-Hui, Wang Jin-Huan, Yang Yun-Fei, Yang Feng-Tang

机构信息

Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China.

出版信息

Yi Chuan Xue Bao. 2002 Feb;29(2):124-7.

PMID:11901994
Abstract

We have established a comparative chromosome map between red panda (Ailurus fulgens, 2n = 36) and dog by chromosome painting with biotin-labelled chromosome-specific probes of the dog. Dog probes specific for the 38 automates delineated 71 homologous segments in the metaphase chromosomes of red panda. Of the 38 autosomal paints, 18 probes each delineated one homologous segment in red panda genome, while the other 20 ones each detected two to five homologous segments. The dog X chromosome-specific paint delineated the whole X chromosome of the red panda. The results indicate that at least 28 fissions (breaks), 49 fusions and 4 inversions were needed to "convert" the dog karyotype to that of the red panda, suggesting that extensive chromosome rearrangements differentiate the karyotypes of red panda and dog. Based on the established comparative chromosome homologies of dog and domestic cat, we could infer that there were 26 segments of conserved synteny between red panda and domestic cat. Comparative analysis of the distribution patterns of conserved segments defined by dog paints in red panda and domestic cat genomes revealed at least 2 cryptic inversions in two large chromosomal regions of conserved synteny between red panda and domestic cat. The karyotype of red panda shows high degree of homology with that of domestic cat.

摘要

我们利用生物素标记的犬染色体特异性探针进行染色体涂染,建立了小熊猫(小熊猫属,2n = 36)与犬之间的比较染色体图谱。针对犬38条常染色体的特异性探针在小熊猫中期染色体上划定了71个同源区段。在38条常染色体涂染探针中,18条探针各自在小熊猫基因组中划定了一个同源区段,而另外20条探针各自检测到了两到五个同源区段。犬X染色体特异性涂染探针划定了小熊猫的整条X染色体。结果表明,要将犬的核型“转换”为小熊猫的核型,至少需要28次断裂、49次融合和4次倒位,这表明广泛的染色体重排使小熊猫和犬的核型产生了差异。基于已建立的犬与家猫的比较染色体同源性,我们可以推断小熊猫与家猫之间存在26个保守同线区段。对犬涂染探针在小熊猫和家猫基因组中所定义的保守区段分布模式进行比较分析,发现在小熊猫和家猫保守同线的两个大染色体区域中至少存在2次隐匿倒位。小熊猫的核型与家猫的核型显示出高度同源性。

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引用本文的文献

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Karyotype Evolution in 10 Pinniped Species: Variability of Heterochromatin versus High Conservatism of Euchromatin as Revealed by Comparative Molecular Cytogenetics.10 种鳍足类物种的核型进化:比较分子细胞遗传学揭示的异染色质变异性与常染色质的高度保守性。
Genes (Basel). 2020 Dec 10;11(12):1485. doi: 10.3390/genes11121485.
2
Chromosome-level genome assembly for giant panda provides novel insights into Carnivora chromosome evolution.大熊猫染色体水平基因组组装为食肉动物染色体进化提供了新的见解。
Genome Biol. 2019 Dec 6;20(1):267. doi: 10.1186/s13059-019-1889-7.
3
Chromosomal rearrangements and karyotype evolution in carnivores revealed by chromosome painting.
染色体涂染揭示食肉动物的染色体重排和核型进化。
Heredity (Edinb). 2012 Jan;108(1):17-27. doi: 10.1038/hdy.2011.107. Epub 2011 Nov 16.
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Chromosome painting shows that skunks (Mephitidae, Carnivora) have highly rearranged karyotypes.染色体描绘显示,臭鼬(食肉目,臭鼬科)具有高度重排的核型。
Chromosome Res. 2008;16(8):1215-31. doi: 10.1007/s10577-008-1270-2. Epub 2008 Nov 25.
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Comparative chromosome painting defines the karyotypic relationships among the domestic dog, Chinese raccoon dog and Japanese raccoon dog.比较染色体描绘确定了家犬、貉和日本貉之间的核型关系。
Chromosome Res. 2003;11(8):735-40. doi: 10.1023/b:chro.0000005760.03266.29.
6
The genome phylogeny of domestic cat, red panda and five mustelid species revealed by comparative chromosome painting and G-banding.通过比较染色体描绘和G带分析揭示家猫、小熊猫和五种鼬科动物的基因组系统发育。
Chromosome Res. 2002;10(3):209-22. doi: 10.1023/a:1015292005631.