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水合1,2-二木蜡酰磷脂酰胆碱单层的恒常压、恒表面张力和恒温分子动力学模拟

Constant normal pressure, constant surface tension, and constant temperature molecular dynamics simulation of hydrated 1,2-dilignoceroylphosphatidylcholine monolayer.

作者信息

Sun Feng

机构信息

Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

出版信息

Biophys J. 2002 May;82(5):2511-9. doi: 10.1016/S0006-3495(02)75594-X.

Abstract

A constant normal pressure, constant surface tension, and constant temperature (NP(N)gammaT) molecular dynamics (MD) simulation of the liquid condensed phase of a 1,2-dilignoceroylphosphatidylcholine (DLGPC) monolayer has been performed at 293.15 K. A DLGPC molecule has two saturated 24-carbon acyl chains, giving the hydrocarbon core thickness of the monolayer approximately 28 A, which is close to the hydrocarbon core thickness of a membrane of a living system. NP(N)gammaT ensemble was used to reproduce the experimental observations, such as area/lipid, because surface tension is an essential factor in determining the monolayer structure. Data analysis on DLGPC/water monolayer shows that various liquid condensed-phase properties of the monolayer have been well reproduced from the simulation, indicating that surface tension 22.9 mN/M used in the simulation is an appropriate condition for the condensed-phase NP(N)gammaT simulation. The simulation results suggest that this long-chain phospholipid monolayer shares many structural characteristics with typical short-chain 1,2-diacylphosphatidylcholine systems, such as DPPC/water monolayer in the condensed phase and DPPC/water bilayer in the gel phase. Furthermore, it was found that DLGPC/water monolayer has almost completely rotationally disordered acyl chains, which have not been observed so far in short-chain 1,2-diacylphosphatidylcholine/water bilayers. This study indicates the good biological relevance of the DLGPC/water monolayer which might be useful in protein/lipid studies to reveal protein structure and protein/lipid interactions in a membrane environment.

摘要

在293.15 K下,对1,2 - 二神经酰基磷脂酰胆碱(DLGPC)单层的液体凝聚相进行了恒压、恒表面张力和恒温(NP(N)γT)分子动力学(MD)模拟。一个DLGPC分子有两条饱和的24碳酰基链,使得单层的烃核厚度约为28 Å,这与生物系统膜的烃核厚度相近。使用NP(N)γT系综来重现诸如面积/脂质等实验观测结果,因为表面张力是决定单层结构的一个重要因素。对DLGPC/水单层的数据分析表明,模拟很好地重现了单层的各种液体凝聚相性质,这表明模拟中使用的22.9 mN/M的表面张力是凝聚相NP(N)γT模拟的合适条件。模拟结果表明,这种长链磷脂单层与典型的短链1,2 - 二酰基磷脂酰胆碱系统具有许多结构特征,例如凝聚相的二棕榈酰磷脂酰胆碱/水单层和凝胶相的二棕榈酰磷脂酰胆碱/水双层。此外,发现DLGPC/水单层的酰基链几乎完全旋转无序,这在短链1,2 - 二酰基磷脂酰胆碱/水双层中尚未观察到。这项研究表明DLGPC/水单层具有良好的生物学相关性,这可能有助于蛋白质/脂质研究,以揭示膜环境中的蛋白质结构和蛋白质/脂质相互作用。

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