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[细菌基因组岛:组织、功能及其在进化中的作用]

[Bacterial genomic islands: organization, function, and role in evolution].

作者信息

Il'ina T S, Romanova Iu M

机构信息

Gamaleya Institute of Epidemiology and Microbiology, Russian Academy of Medical Sciences, Moscow, 123098 Russia.

出版信息

Mol Biol (Mosk). 2002 Mar-Apr;36(2):228-39.

Abstract

Data on the structural organization and evolutionary role of specific bacterial DNA regions known as genomic islands are reviewed. Emphasis is placed on the most extensively studied genomic islands, pathogenicity islands (PAIs), which are present in the chromosome of Gram-negative and Gram-positive pathogenic bacteria and absent from related nonpathogenic strains. PAIs are extended DNA regions that harbor virulence genes and often differ in GC content from the remainder of the bacterial genome. Many PAI occur in the tRNA genes, which provide a convenient target for foreign gene insertion. Some PAI are highly homologous to each other and contain sequences similar to ISs, phage att sites, and plasmid ori sites, along with functional or defective integrase and transposase genes, suggesting horizontal transfer of PAI among bacteria.

摘要

本文综述了有关特定细菌DNA区域(即基因组岛)的结构组织和进化作用的数据。重点关注研究最为广泛的基因组岛——致病岛(PAIs),它们存在于革兰氏阴性和革兰氏阳性致病细菌的染色体中,而相关的非致病菌株中则不存在。致病岛是含有毒力基因的延伸DNA区域,其GC含量通常与细菌基因组的其余部分不同。许多致病岛存在于tRNA基因中,这为外源基因插入提供了便利的靶点。一些致病岛彼此高度同源,包含与插入序列、噬菌体附着位点和质粒ori位点相似的序列,以及功能性或缺陷性的整合酶和转座酶基因,这表明致病岛在细菌之间存在水平转移。

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