Kloda Anna, Martinac Boris
Department of Pharmacology, QEII Medical Center, The University of Western Australia, Crawley.
Eur Biophys J. 2002 Mar;31(1):14-25. doi: 10.1007/s002490100160.
The ubiquity of mechanosensitive (MS) ion channels set off a search for their functional homologues in archaea, the third domain of life. A new MS channel was identified in the archaeon Methanococcus jannaschii by using the TM1 transmembrane domain of the bacterial MS channel of large conductance, MscL, as a genetic probe to search the archaeal genomic database for MS channel homologues. The hypothetical protein MJ0170 (MscMJ) was found to harbor two MscL-like TM1 structural motifs and showed a high degree of se quence and secondary structure conservation with MscS (YggB) homologues. The alignment of sequences of MscL, MscS and MscMJ homologues further revealed that bacterial and archaeal channels form a phylogenetic tree composed of three main branches and share a common ancestral origin. This suggests the evolution of prokaryotic MS channels via gene duplication of a MscL-like progenitor gene followed by divergence, fur ther indicating that the common ancestor of the prokaryotic MS channels most likely resembled MscL. When expressed in E. coli and functionally examined by the patch clamp, the MscMJ protein behaved as a MS channel with a conductance of 270 pS in 200 mM KCl and a cation selectivity (PK/PC]) of approximately 6. The structural and functional homologue of MscMJ, MscMJLR, was identified as a second type of MS channel in M. jannaschii. The channel has a conductance of approximately 2 nS, rectifies with voltage and shares cation selectivity with MscMJ. The stoichiometry of both types of MS channels revealed that the free energy of activation, deltaG0 approximately 7kT, obtained for MscMJ matches the one calculated for MscS, deltaG0 approximately 5kT, whereas the free energy of activation approximately deltaG0 approximately 18kT of MscMJLR resembles more the deltaG0 = 14-19kT reported for MscL. The presence of two types of MS channels discovered in the cell envelope of M. jannaschii indicates that multiplicity of MS channels in prokaryotes is a necessary element for their survival in the habitats frequently challenged by sudden changes in osmolarity. Further functional and phylogenetic study of MS channels from all three domains of the universal phylogenetic tree may help to understand the evolution and common biophysical principles that govern mechanosensory transduction.
机械敏感(MS)离子通道的广泛存在引发了对其在古菌(生命的第三个域)中的功能同源物的探寻。通过使用大电导细菌MS通道MscL的TM1跨膜结构域作为遗传探针,在古菌詹氏甲烷球菌中鉴定出一种新的MS通道,以在古菌基因组数据库中搜索MS通道同源物。发现假设蛋白MJ0170(MscMJ)含有两个类似MscL的TM1结构基序,并且与MscS(YggB)同源物具有高度的序列和二级结构保守性。MscL、MscS和MscMJ同源物的序列比对进一步揭示,细菌和古菌通道形成了一个由三个主要分支组成的系统发育树,并共享一个共同的祖先起源。这表明原核生物MS通道是通过一个类似MscL的祖先基因的基因复制,随后发生分化而进化的,进一步表明原核生物MS通道的共同祖先很可能类似于MscL。当在大肠杆菌中表达并通过膜片钳进行功能检测时,MscMJ蛋白表现为一个MS通道,在200 mM KCl中的电导为270 pS,阳离子选择性(PK/PC])约为6。MscMJ的结构和功能同源物MscMJLR被鉴定为詹氏甲烷球菌中的第二种MS通道类型。该通道的电导约为2 nS,具有电压整流特性,并与MscMJ共享阳离子选择性。两种类型的MS通道的化学计量学表明,MscMJ获得的激活自由能ΔG0约为7kT,与为MscS计算的自由能相匹配,ΔG0约为5kT,而MscMJLR的激活自由能约为ΔG0约为18kT,更类似于报道的MscL的ΔG0 = 14 - 19kT。在詹氏甲烷球菌细胞膜中发现的两种类型的MS通道表明,原核生物中MS通道的多样性是它们在经常受到渗透压突然变化挑战的生境中生存的必要因素。对通用系统发育树所有三个域中的MS通道进行进一步的功能和系统发育研究,可能有助于理解控制机械感觉转导的进化和共同生物物理原理。