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祖先状态估计的稳健性:姬蜂类寄生蜂生活史策略的演化

Robustness of ancestral state estimates: evolution of life history strategy in ichneumonoid parasitoids.

作者信息

Belshaw Robert, Quicke Donald L J

机构信息

Department of Biological Sciences, Imperial College at Silwood Park, Ascot, Berkshire SL5 7PY, UK.

出版信息

Syst Biol. 2002 Jun;51(3):450-77. doi: 10.1080/10635150290069896.

Abstract

We test hypotheses for the evolution of a life history trait among a group of parasitoid wasps (Hymenoptera: Ichneumonoidea), namely, the transition among koinobiont parasitoids (parasitoids whose hosts continue development after oviposition) between attacking exposed hosts and attacking hosts that are concealed within plant tissue. Using a range of phylogeny estimates based on 28S rDNA sequences, we use maximum parsimony (MP) and maximum likelihood (ML) methods to estimate the ancestral life history traits for the main clades in which both traits occur (using the programs MacClade and Discrete, respectively). We also assess the robustness of these estimates; for MP, we use step matrices in PAUP* to find the minimum weight necessary to reverse estimates or make them ambiguous, and for ML, we measure the differences in likelihood after fixing the ancestral nodes at the alternative states. We also measure the robustness of the MP ancestral state estimate against uncertainties in the phylogeny estimate, manipulating the most-parsimonious tree in MacClade to find the shortest suboptimal tree in which the ancestral state estimate is reversed or made ambiguous. Using these methods, we find strong evidence supporting two transitions among koinobiont Ichneumonoidea: (1) to attacking exposed hosts in a clade consisting of the Helconinae and related subfamilies, and (2) the reverse transition in a clade consisting of the Euphorinae and related subfamilies. In exploring different methods of analyzing variable-length DNA sequences, we found that direct optimization with POY gave some clearly erroneous results that had a profound effect on the overall phylogeny estimate. We also discuss relationships within the superfamily and expand the Mesostoinae to include all the gall-associated braconids that form the sister group of the Aphidiinae.

摘要

我们对一类寄生蜂(膜翅目:姬蜂总科)生活史特征的进化进行了假设检验,即共寄生蜂(产卵后宿主仍继续发育的寄生蜂)在攻击暴露宿主和攻击隐藏在植物组织内的宿主之间的转变。基于28S rDNA序列使用一系列系统发育估计,我们分别使用最大简约法(MP)和最大似然法(ML)(分别使用程序MacClade和Discrete)来估计两种特征都出现的主要分支的祖先生活史特征。我们还评估了这些估计的稳健性;对于MP,我们在PAUP*中使用步长矩阵来找到反转估计或使其模糊所需的最小权重,对于ML,我们在将祖先节点固定在替代状态后测量似然性的差异。我们还针对系统发育估计中的不确定性测量MP祖先状态估计的稳健性,在MacClade中操作最简约树以找到祖先状态估计被反转或变得模糊的最短次优树。使用这些方法,我们发现有力证据支持共寄生姬蜂总科中的两次转变:(1)在由Helconinae及相关亚科组成的分支中转变为攻击暴露宿主,以及(2)在由Euphorinae及相关亚科组成的分支中发生反向转变。在探索分析可变长度DNA序列的不同方法时,我们发现使用POY进行直接优化会得出一些明显错误的结果,这些结果对整体系统发育估计有深远影响。我们还讨论了总科内的关系,并将中腹茧蜂亚科扩展到包括所有与瘿相关的茧蜂,这些茧蜂构成蚜茧蜂亚科的姐妹群。

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