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[肺腺癌细胞系差异表达cDNA片段的定位及表达分析]

[Mapping and expression analysis of a different expression cDNA fragment from lung adenocarcinoma cell line].

作者信息

Fan Hong, Li Yu, Feng Hui-Chen, Lü Bing-Jie, Fu Song-Bin, Zhang Gui-Yin, Li Pu

机构信息

Laboratory of Medical Genetics, Ha'erbin Medical University, Ha'erbin 150086, China.

出版信息

Yi Chuan Xue Bao. 2002 Jun;29(6):476-80.

PMID:12096622
Abstract

Lung cancer is one of the most common malignant tumors in humans. Metastasis is the basic biological feature of malignant tumors, which is the main cause of death. Molecular mechanism of metastasis is still unclear, although lots of studies have been done in tumor metastasis. To study and explore the molecular basis of metastasis in lung cancer, and isolate tumor metastasis-related genes, two human lung adenocarcinoma cell lines AGZY 83-a and Anip 973 were chosen as research materials. The Anip973 was derived from AGZY83-a, but manifested much higher metastasis potential than the parent line. Using mRNA differential display technique, an unknown cDNA fragment, OPB7-1, which is over-expressive in Anip973 cell line, was obtained. It was used as a template to isolate its corresponding cDNA through dbEST searching and PCR. To search and clone lung adenocarcinoma metastasis-related candidate gene, and to explore the molecular basis of development of lung carcinoma, differential expression of OPB7-1 cDNA fragment among 9 human lung adenocarcinoma cell lines and 12 normal human tissues were detected using cell culture, cDNA clone, Northern blot analysis and bioinformation technology. Results showed that there were significant differences in OPB7-1 expression among 9 human lung adenocarcinoma cell lines. High expression tendency was observed in Anip973 cell line with high metastasis potential, TKB-18 cell line with high invasion potential and GLC-82 cell line with low differentiation potential. Besides, a bigger fragment can be found in Anip973 cell line on the Northern blot hybridization. The 3.0 kb transcriptions were found in various tissues. Over-expression in heart and skeletal muscle could be observed, whereas expression in spleen, liver, kidney, placental and lung could be found except colon, thyroid gland and small intestine. These manifests indicate that OPB7-1 gene has a wide-rage expression in human multiple tissues. A 1.0 kb cDNA fragment was acquired by linking up EST fragments homologous match 5' end and PCR. BLAST analysis revealed that OPB7-1 gene has extremely low sequence identity with any known genes from GenBank and any sequences from EST database. The chromosomal localization of it was determined by RH location method. The OPB7-1 fragment was localized to chromosome 1p31-34. That OPB7-1 gene has an extensive expression pattern, may be a novel tumor gene related to lung carcinoma. Further research needs to be done to obtain the full-length cDNA of OPB7-1 gene. It will be helpful to investigate the expression in lung cancer cases and other tumor tissues for further determining the function of OPB7-1 gene in development of tumor.

摘要

肺癌是人类最常见的恶性肿瘤之一。转移是恶性肿瘤的基本生物学特征,也是主要的死亡原因。尽管在肿瘤转移方面已经进行了大量研究,但转移的分子机制仍不清楚。为了研究和探索肺癌转移的分子基础,并分离肿瘤转移相关基因,选择了两个人肺腺癌细胞系AGZY 83-a和Anip 973作为研究材料。Anip973源自AGZY83-a,但转移潜能比亲代细胞系高得多。利用mRNA差异显示技术,获得了一个在Anip973细胞系中过表达的未知cDNA片段OPB7-1。以其为模板,通过dbEST搜索和PCR分离其相应的cDNA。为了寻找和克隆肺腺癌转移相关候选基因,并探索肺癌发生发展的分子基础,利用细胞培养、cDNA克隆、Northern印迹分析和生物信息技术检测了OPB7-1 cDNA片段在9个人肺腺癌细胞系和12个正常人组织中的差异表达。结果显示,9个人肺腺癌细胞系中OPB7-1的表达存在显著差异。在转移潜能高的Anip973细胞系、侵袭潜能高的TKB-18细胞系和分化潜能低的GLC-82细胞系中观察到高表达趋势。此外,在Northern印迹杂交中,Anip973细胞系中可发现一个更大的片段。在各种组织中发现了3.0 kb的转录本。在心脏和骨骼肌中可观察到过表达,而在脾脏、肝脏、肾脏、胎盘和肺中可检测到表达,但结肠、甲状腺和小肠除外。这些结果表明OPB7-1基因在人类多种组织中广泛表达。通过连接同源匹配的5'端EST片段和PCR获得了一个1.0 kb的cDNA片段。BLAST分析显示,OPB7-1基因与GenBank中任何已知基因以及EST数据库中的任何序列的序列同一性极低。通过RH定位法确定了其染色体定位。OPB7-1片段定位于染色体1p31-34。OPB7-1基因具有广泛的表达模式,可能是一个与肺癌相关的新肿瘤基因。需要进一步研究以获得OPB7-1基因的全长cDNA。研究其在肺癌病例和其他肿瘤组织中的表达,将有助于进一步确定OPB7-1基因在肿瘤发生发展中的功能。

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