• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人类免疫缺陷病毒1型gag-pol移码茎环结构的天然变体分析。

Analysis of natural variants of the human immunodeficiency virus type 1 gag-pol frameshift stem-loop structure.

作者信息

Telenti Amalio, Martinez Raquel, Munoz Miguel, Bleiber Gabriela, Greub Gilbert, Sanglard Dominique, Peters Solange

机构信息

Division of Infectious Diseases and Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland.

出版信息

J Virol. 2002 Aug;76(15):7868-73. doi: 10.1128/jvi.76.15.7868-7873.2002.

DOI:10.1128/jvi.76.15.7868-7873.2002
PMID:12097600
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC136395/
Abstract

Human immunodeficiency virus type 1 uses ribosomal frameshifting for translation of the Gag-Pol polyprotein. Frameshift activities are thought to be tightly regulated. Analysis of gag p1 sequences from 270 plasma virions identified in 64% of the samples the occurrence of polymorphism that could lead to changes in thermodynamic stability of the stem-loop. Expression in Saccharomyces cerevisiae of p1-beta-galactosidase fusion proteins from 10 representative natural stem-loop variants and three laboratory mutant constructs (predicted the thermodynamic stability [Delta G degrees] ranging from -23.0 to -4.3 kcal/mol) identified a reduction in frameshift activity of 13 to 67% compared with constructs with the wild-type stem-loop (Delta G degrees, -23.5 kcal/mol). Viruses carrying stem-loops associated with greater than 60% reductions in frameshift activity presented profound defects in viral replication. In contrast, viruses with stem-loop structures associated with 16 to 42% reductions in frameshift efficiency displayed no significant viral replication deficit.

摘要

1型人类免疫缺陷病毒利用核糖体移码来翻译Gag-Pol多蛋白。移码活性被认为受到严格调控。对来自270个血浆病毒粒子的gag p1序列进行分析,在64%的样本中发现了多态性的出现,这可能导致茎环热力学稳定性的改变。来自10个代表性天然茎环变体和3个实验室突变构建体(预测的热力学稳定性[ΔG°]范围为-23.0至-4.3千卡/摩尔)的p1-β-半乳糖苷酶融合蛋白在酿酒酵母中的表达表明,与具有野生型茎环(ΔG°,-23.5千卡/摩尔)的构建体相比,移码活性降低了13%至67%。携带与移码活性降低超过60%相关的茎环的病毒在病毒复制中表现出严重缺陷。相比之下,具有与移码效率降低16%至42%相关的茎环结构的病毒没有显示出明显的病毒复制缺陷。

相似文献

1
Analysis of natural variants of the human immunodeficiency virus type 1 gag-pol frameshift stem-loop structure.人类免疫缺陷病毒1型gag-pol移码茎环结构的天然变体分析。
J Virol. 2002 Aug;76(15):7868-73. doi: 10.1128/jvi.76.15.7868-7873.2002.
2
The virion-associated Gag-Pol is decreased in chimeric Moloney murine leukemia viruses in which the readthrough region is replaced by the frameshift region of the human immunodeficiency virus type 1.在嵌合莫洛尼鼠白血病病毒中,病毒体相关的Gag-Pol减少,其中通读区域被人类免疫缺陷病毒1型的移码区域所取代。
Virology. 2005 Apr 10;334(2):342-52. doi: 10.1016/j.virol.2005.01.044.
3
Differential stability of the mRNA secondary structures in the frameshift site of various HIV type 1 viruses.不同HIV-1病毒移码位点处mRNA二级结构的差异稳定性
AIDS Res Hum Retroviruses. 1999 Nov 20;15(17):1591-6. doi: 10.1089/088922299309892.
4
Stability of HIV Frameshift Site RNA Correlates with Frameshift Efficiency and Decreased Virus Infectivity.HIV移码位点RNA的稳定性与移码效率及病毒感染性降低相关。
J Virol. 2016 Jul 11;90(15):6906-6917. doi: 10.1128/JVI.00149-16. Print 2016 Aug 1.
5
Characterization of the frameshift stimulatory signal controlling a programmed -1 ribosomal frameshift in the human immunodeficiency virus type 1.控制人类免疫缺陷病毒1型中程序性-1核糖体移码的移码刺激信号的表征。
Nucleic Acids Res. 2002 Dec 1;30(23):5094-102. doi: 10.1093/nar/gkf657.
6
Replacement of murine leukemia virus readthrough mechanism by human immunodeficiency virus frameshift allows synthesis of viral proteins and virus replication.用人类免疫缺陷病毒移码机制取代鼠白血病病毒通读机制可实现病毒蛋白的合成及病毒复制。
J Virol. 2003 Mar;77(5):3345-50. doi: 10.1128/jvi.77.5.3345-3350.2003.
7
Efficiency of a programmed -1 ribosomal frameshift in the different subtypes of the human immunodeficiency virus type 1 group M.1型人类免疫缺陷病毒M组不同亚型中程序性-1核糖体移码的效率
RNA. 2003 Oct;9(10):1246-53. doi: 10.1261/rna.5113603.
8
A review on architecture of the gag-pol ribosomal frameshifting RNA in human immunodeficiency virus: a variability survey of virus genotypes.人类免疫缺陷病毒中gag-pol核糖体移码RNA结构综述:病毒基因型的变异性调查
J Biomol Struct Dyn. 2017 Jun;35(8):1629-1653. doi: 10.1080/07391102.2016.1194231. Epub 2016 Aug 2.
9
Proline residues within spacer peptide p1 are important for human immunodeficiency virus type 1 infectivity, protein processing, and genomic RNA dimer stability.间隔肽p1内的脯氨酸残基对1型人类免疫缺陷病毒的感染性、蛋白质加工及基因组RNA二聚体稳定性至关重要。
J Virol. 2002 Nov;76(22):11245-53. doi: 10.1128/jvi.76.22.11245-11253.2002.
10
Translational frameshifting at the gag-pol junction of human immunodeficiency virus type 1 is not increased in infected T-lymphoid cells.在感染的T淋巴细胞中,1型人类免疫缺陷病毒gag-pol连接处的翻译移码并未增加。
J Virol. 1994 Mar;68(3):1501-8. doi: 10.1128/JVI.68.3.1501-1508.1994.

引用本文的文献

1
Conformational Analysis and Structure-Altering Mutations of the HIV-1 Frameshifting Element.HIV-1移码元件的构象分析与结构改变突变
Int J Mol Sci. 2025 Jun 30;26(13):6297. doi: 10.3390/ijms26136297.
2
Programmed -1 ribosomal frameshifting from the perspective of the conformational dynamics of mRNA and ribosomes.从mRNA和核糖体构象动力学角度看程序性-1核糖体移码
Comput Struct Biotechnol J. 2021 Jun 14;19:3580-3588. doi: 10.1016/j.csbj.2021.06.015. eCollection 2021.
3
HIV-1 and Human PEG10 Frameshift Elements Are Functionally Distinct and Distinguished by Novel Small Molecule Modulators.HIV-1与人类PEG10移码元件在功能上不同,且可通过新型小分子调节剂加以区分。
PLoS One. 2015 Oct 8;10(10):e0139036. doi: 10.1371/journal.pone.0139036. eCollection 2015.
4
The highly conserved codon following the slippery sequence supports -1 frameshift efficiency at the HIV-1 frameshift site.位于滑序列之后的高度保守密码子支持HIV-1移码位点处的-1移码效率。
PLoS One. 2015 Mar 25;10(3):e0122176. doi: 10.1371/journal.pone.0122176. eCollection 2015.
5
Switch from cap- to factorless IRES-dependent 0 and +1 frame translation during cellular stress and dicistrovirus infection.在细胞应激和双顺反子病毒感染期间,从帽依赖性翻译转换为无因子的内部核糖体进入位点(IRES)依赖性的0和+1框翻译。
PLoS One. 2014 Aug 4;9(8):e103601. doi: 10.1371/journal.pone.0103601. eCollection 2014.
6
Modulation of stop codon read-through efficiency and its effect on the replication of murine leukemia virus.终止密码子通读效率的调控及其对鼠白血病病毒复制的影响。
J Virol. 2014 Sep;88(18):10364-76. doi: 10.1128/JVI.00898-14. Epub 2014 Jul 2.
7
Determinants of Moloney murine leukemia virus Gag-Pol and genomic RNA proportions.莫洛尼鼠白血病病毒Gag-Pol和基因组RNA比例的决定因素。
J Virol. 2014 Jul;88(13):7267-75. doi: 10.1128/JVI.03513-13. Epub 2014 Apr 16.
8
High-affinity recognition of HIV-1 frameshift-stimulating RNA alters frameshifting in vitro and interferes with HIV-1 infectivity.高亲和力识别 HIV-1 框架移位刺激 RNA 改变体外框架移位并干扰 HIV-1 感染性。
J Med Chem. 2014 Feb 13;57(3):723-32. doi: 10.1021/jm401438g. Epub 2014 Jan 15.
9
RNA dimerization plays a role in ribosomal frameshifting of the SARS coronavirus.RNA 二聚化在 SARS 冠状病毒的核糖体移码中起作用。
Nucleic Acids Res. 2013 Feb 1;41(4):2594-608. doi: 10.1093/nar/gks1361. Epub 2012 Dec 28.
10
HIV-1 frameshift efficiency is primarily determined by the stability of base pairs positioned at the mRNA entrance channel of the ribosome.HIV-1 框架移位效率主要由核糖体 mRNA 入口通道中碱基对的稳定性决定。
Nucleic Acids Res. 2013 Feb 1;41(3):1901-13. doi: 10.1093/nar/gks1254. Epub 2012 Dec 16.

本文引用的文献

1
Individual contributions of mutant protease and reverse transcriptase to viral infectivity, replication, and protein maturation of antiretroviral drug-resistant human immunodeficiency virus type 1.突变蛋白酶和逆转录酶对耐抗逆转录病毒药物的1型人类免疫缺陷病毒的病毒感染性、复制及蛋白质成熟的个体贡献。
J Virol. 2001 Apr;75(7):3291-300. doi: 10.1128/JVI.75.7.3291-3300.2001.
2
Polymorphism of HIV type 1 gag p7/p1 and p1/p6 cleavage sites: clinical significance and implications for resistance to protease inhibitors.1型人类免疫缺陷病毒gag p7/p1和p1/p6裂解位点的多态性:临床意义及对蛋白酶抑制剂耐药性的影响
AIDS Res Hum Retroviruses. 2000 Sep 1;16(13):1209-13. doi: 10.1089/08892220050116970.
3
Effect of protease inhibitors on HIV-1 maturation and infectivity.蛋白酶抑制剂对HIV-1成熟及感染性的影响。
Antiviral Res. 2000 Jan;45(1):59-68. doi: 10.1016/s0166-3542(99)00074-1.
4
Differential stability of the mRNA secondary structures in the frameshift site of various HIV type 1 viruses.不同HIV-1病毒移码位点处mRNA二级结构的差异稳定性
AIDS Res Hum Retroviruses. 1999 Nov 20;15(17):1591-6. doi: 10.1089/088922299309892.
5
Proteolytic processing of HIV-1 protease precursor, kinetics and mechanism.HIV-1蛋白酶前体的蛋白水解加工、动力学及机制
J Biol Chem. 1999 Aug 13;274(33):23437-42. doi: 10.1074/jbc.274.33.23437.
6
Competitive inhibition of human immunodeficiency virus type-1 protease by the Gag-Pol transframe protein.Gag-Pol 移码蛋白对人类免疫缺陷病毒 1 型蛋白酶的竞争性抑制作用。
J Biol Chem. 1999 Jul 30;274(31):21539-43. doi: 10.1074/jbc.274.31.21539.
7
Conserved cysteines of the human immunodeficiency virus type 1 protease are involved in regulation of polyprotein processing and viral maturation of immature virions.人类免疫缺陷病毒1型蛋白酶的保守半胱氨酸参与未成熟病毒体的多蛋白加工调控和病毒成熟过程。
J Virol. 1999 Feb;73(2):1156-64. doi: 10.1128/JVI.73.2.1156-1164.1999.
8
ATPase and multidrug transport activities of the overexpressed yeast ABC protein Yor1p.过表达的酵母ABC蛋白Yor1p的ATP酶活性和多药转运活性
J Biol Chem. 1998 May 15;273(20):12612-22. doi: 10.1074/jbc.273.20.12612.
9
Importance of ribosomal frameshifting for human immunodeficiency virus type 1 particle assembly and replication.核糖体移码对1型人类免疫缺陷病毒颗粒组装和复制的重要性。
J Virol. 1998 Jun;72(6):4819-24. doi: 10.1128/JVI.72.6.4819-4824.1998.
10
In vivo HIV-1 frameshifting efficiency is directly related to the stability of the stem-loop stimulatory signal.体内HIV-1移码效率与茎环刺激信号的稳定性直接相关。
RNA. 1997 Oct;3(10):1153-8.