Fry James D, Heinsohn Stefanie L
Department of Biology, University of Rochester, Rochester, NY 14627-0211, USA.
Genetics. 2002 Jul;161(3):1155-67. doi: 10.1093/genetics/161.3.1155.
The genomic rate of mildly deleterious mutations (U) figures prominently in much evolutionary and ecological theory. In Drosophila melanogaster, estimates of U have varied widely, from <0.1 to nearly 1 per zygote. The source of this variation is unknown, but could include differences in the conditions used for assaying fitness traits. We examined how assay conditions affect estimates of the rates and effects of viability-depressing mutations in two sets of lines with accumulated spontaneous mutations on the second chromosome. In each set, the among-line variance in egg-to-adult viability was significantly greater when viability was assayed using a high parental density than when it was assayed using a low density. In contrast, the proportional decline in viability due to new mutations did not differ between densities. Two other manipulations, lowering the temperature and adding ethanol to the medium, had no significant effects on either the mean decline or among-line variance. Cross-environment genetic correlations in viability were generally close to one, implying that most mutations reduced viability in all environments. Using data from the low-density, lower-bound estimates of U approached the classic, high values of Mukai and Ohnishi; at the high density, U estimates were similar to recently reported low values. The difference in estimated mutation rates, taken at face value, would imply that many mutations affected fitness at low density but not at high density, but this is shown to be incompatible with the observed high cross-environment correlations. Possible reasons for this discrepancy are discussed. Regardless of the interpretation, the results show that assay conditions can have a large effect on estimates of mutational parameters for fitness traits.
轻度有害突变的基因组速率(U)在许多进化和生态理论中占据重要地位。在黑腹果蝇中,U的估计值差异很大,从每个合子小于0.1到接近1。这种变异的来源尚不清楚,但可能包括用于测定适合度性状的条件差异。我们研究了测定条件如何影响两组在第二条染色体上积累了自发突变的品系中降低活力的突变率和效应的估计值。在每组中,当使用高亲本密度测定活力时,卵到成虫活力的品系间方差显著大于使用低密度测定时。相比之下,新突变导致的活力比例下降在不同密度之间没有差异。另外两种操作,降低温度和向培养基中添加乙醇,对平均下降或品系间方差均无显著影响。活力的跨环境遗传相关性通常接近1,这意味着大多数突变在所有环境中都会降低活力。使用来自低密度的数据,U的下限估计值接近经典的Mukai和Ohnishi的高值;在高密度下,U的估计值与最近报道的低值相似。从表面价值来看,估计突变率的差异意味着许多突变在低密度时影响适合度,但在高密度时不影响,但这与观察到的高跨环境相关性不相符。讨论了这种差异的可能原因。无论作何解释,结果表明测定条件会对适合度性状的突变参数估计产生很大影响。