Suppr超能文献

刺桐凝集素与乳糖及2'-α-L-岩藻糖基乳糖复合物的高分辨率晶体结构及其与热力学结合数据的相关性

High-resolution crystal structures of Erythrina cristagalli lectin in complex with lactose and 2'-alpha-L-fucosyllactose and correlation with thermodynamic binding data.

作者信息

Svensson Cecilia, Teneberg Susann, Nilsson Carol L, Kjellberg Anders, Schwarz Frederick P, Sharon Nathan, Krengel Ute

机构信息

Department of Molecular Biotechnology and Center for Structural Biology, Chalmers University of Technology, P. O. Box 462, SE-405-30 Goteborg, Sweden.

出版信息

J Mol Biol. 2002 Aug 2;321(1):69-83. doi: 10.1016/s0022-2836(02)00554-5.

Abstract

The primary sequence of Erythrina cristagalli lectin (ECL) was mapped by mass spectrometry, and the crystal structures of the lectin in complex with lactose and 2'-alpha-L-fucosyllactose were determined at 1.6A and 1.7A resolution, respectively. The two complexes were compared with the crystal structure of the closely related Erythrina corallodendron lectin (ECorL) in complex with lactose, with the crystal structure of the Ulex europaeus lectin II in complex with 2'-alpha-L-fucosyllactose, and with two modeled complexes of ECorL with 2'-alpha-L-fucosyl-N-acetyllactosamine. The molecular models are very similar to the crystal structure of ECL in complex with 2'-alpha-L-fucosyllactose with respect to the overall mode of binding, with the L-fucose fitting snugly into the cavity surrounded by Tyr106, Tyr108, Trp135 and Pro134 adjoining the primary combining site of the lectin. Marked differences were however noted between the models and the experimental structure in the network of hydrogen bonds and hydrophobic interactions holding the L-fucose in the combining site of the lectin, pointing to limitations of the modeling approach. In addition to the structural characterization of the ECL complexes, an effort was undertaken to correlate the structural data with thermodynamic data obtained from microcalorimetry, revealing the importance of the water network in the lectin combining site for carbohydrate binding.

摘要

通过质谱法测定了刺桐凝集素(ECL)的一级序列,并分别以1.6埃和1.7埃的分辨率确定了该凝集素与乳糖及2'-α-L-岩藻糖基乳糖复合物的晶体结构。将这两种复合物与密切相关的珊瑚刺桐凝集素(ECorL)与乳糖复合物的晶体结构、欧洲荆豆凝集素II与2'-α-L-岩藻糖基乳糖复合物的晶体结构,以及ECorL与2'-α-L-岩藻糖基-N-乙酰乳糖胺的两种模拟复合物进行了比较。就整体结合模式而言,分子模型与ECL与2'-α-L-岩藻糖基乳糖复合物的晶体结构非常相似,L-岩藻糖紧密地嵌入由Tyr106、Tyr108、Trp135和Pro134围绕的腔中,该腔毗邻凝集素的主要结合位点。然而,在将L-岩藻糖固定在凝集素结合位点的氢键和疏水相互作用网络中,模型与实验结构之间存在明显差异,这表明建模方法存在局限性。除了对ECL复合物进行结构表征外,还努力将结构数据与微量热法获得的热力学数据相关联,揭示了凝集素结合位点中水分子网络对碳水化合物结合的重要性。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验