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氨基酸残基Q39和E451在确定草地贪夜蛾β-糖苷酶底物特异性中的作用。

The role of amino-acid residues Q39 and E451 in the determination of substrate specificity of the Spodoptera frugiperda beta-glycosidase.

作者信息

Marana Sandro R, Terra Walter R, Ferreira Clélia

机构信息

Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, CP 26077, São Paulo, 05513-970, Brazil.

出版信息

Eur J Biochem. 2002 Aug;269(15):3705-14. doi: 10.1046/j.1432-1033.2002.03061.x.

Abstract

The design of beta-glycosidases with planed substrate specificity for biotechnological application has received little attention. This is mostly a consequence of the lack of data on the molecular basis of the beta-glycosidase specificity, namely data on the energy of the noncovalent interactions in the enzyme-transition state complex. In an attempt to fill this gap, site-directed mutagenesis and enzyme steady-state kinetic experiments with different substrates were conducted, using as model a digestive beta-glycosidase (glycoside hydrolase family 1) from Spodoptera frugiperda (Lepidoptera) (Sfbetagly50). The active site of this enzyme was modeled based on its sequence and on crystallographic data of similar enzymes. Energy of noncovalent interactions in transition state between Sfbetagly50 amino acids and glycone hydroxyls was determined. Sfbetagly50 residue E451 seems to be a key residue in determining beta-glycosidase preference for glucosides vs. galactosides based on the following data: (a) The energy of the noncovalent interaction between glycone equatorial hydroxyl 4 with E451 in the transition state is about 60% higher than its interaction with Q39. (b) The energy of the E451-hydroxyl 4 interaction decreases more than the Q39-hydroxyl 4 interaction when hydroxyl 4 is changed from equatorial to axial position. (c) A Sfbetagly50 mutant, where E451 was substituted by A, hydrolyzes galactosides faster than glucosides. It was also shown that glycone hydroxyl 6 interacts favorably with Q39, but not with E451, probably due to steric hindrance. These interactions result in the beta-glycosidase hydrolyzing fucosides (6-deoxygalactosides) faster than glucosides and galactosides.

摘要

设计具有特定底物特异性的β-糖苷酶用于生物技术应用的研究很少受到关注。这主要是由于缺乏关于β-糖苷酶特异性分子基础的数据,即酶-过渡态复合物中非共价相互作用能量的数据。为了填补这一空白,我们以来自草地贪夜蛾(鳞翅目)的消化性β-糖苷酶(糖苷水解酶家族1)(Sfbetagly50)为模型,进行了定点诱变和不同底物的酶稳态动力学实验。根据该酶的序列和类似酶的晶体学数据对其活性位点进行了建模。确定了Sfbetagly50氨基酸与糖基羟基在过渡态的非共价相互作用能量。基于以下数据,Sfbetagly50残基E451似乎是决定β-糖苷酶对葡萄糖苷与半乳糖苷偏好性的关键残基:(a)在过渡态,糖基赤道面羟基4与E451的非共价相互作用能量比其与Q39的相互作用高约60%。(b)当羟基4从赤道面变为轴向位置时,E451-羟基4相互作用的能量下降幅度大于Q39-羟基4相互作用。(c)E451被A取代的Sfbetagly50突变体水解半乳糖苷的速度比葡萄糖苷快。还表明糖基羟基6与Q39相互作用良好,但与E451不相互作用,可能是由于空间位阻。这些相互作用导致β-糖苷酶水解岩藻糖苷(6-脱氧半乳糖苷)的速度比葡萄糖苷和半乳糖苷快。

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