Suppr超能文献

β-糖苷酶底物苷元结合位点中形成该位点的残基在底物特异性和催化作用中的作用。

The role in the substrate specificity and catalysis of residues forming the substrate aglycone-binding site of a beta-glycosidase.

作者信息

Mendonça Lúcio M F, Marana Sandro R

机构信息

Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, Brazil.

出版信息

FEBS J. 2008 May;275(10):2536-47. doi: 10.1111/j.1742-4658.2008.06402.x. Epub 2008 Apr 15.

Abstract

The relative contributions to the specificity and catalysis of aglycone, of residues E190, E194, K201 and M453 that form the aglycone-binding site of a beta-glycosidase from Spodoptera frugiperda (EC 3.2.1.21), were investigated through site-directed mutagenesis and enzyme kinetic experiments. The results showed that E190 favors the binding of the initial portion of alkyl-type aglycones (up to the sixth methylene group) and also the first glucose unit of oligosaccharidic aglycones, whereas a balance between interactions with E194 and K201 determines the preference for glucose units versus alkyl moieties. E194 favors the binding of alkyl moieties, whereas K201 is more relevant for the binding of glucose units, in spite of its favorable interaction with alkyl moieties. The three residues E190, E194 and K201 reduce the affinity for phenyl moieties. In addition, M453 favors the binding of the second glucose unit of oligosaccharidic aglycones and also of the initial portion of alkyl-type aglycones. None of the residues investigated interacted with the terminal portion of alkyl-type aglycones. It was also demonstrated that E190, E194, K201 and M453 similarly contribute to stabilize ES(double dagger). Their interactions with aglycone are individually weaker than those formed by residues interacting with glycone, but their joint catalytic effects are similar. Finally, these interactions with aglycone do not influence glycone binding.

摘要

通过定点诱变和酶动力学实验,研究了来自草地贪夜蛾(EC 3.2.1.21)的β-糖苷酶的糖苷配基结合位点中,构成该位点的E190、E194、K201和M453残基对糖苷配基特异性和催化作用的相对贡献。结果表明,E190有利于烷基型糖苷配基起始部分(直至第六个亚甲基)的结合,也有利于寡糖型糖苷配基的第一个葡萄糖单元的结合,而与E194和K201的相互作用之间的平衡决定了对葡萄糖单元与烷基部分的偏好。E194有利于烷基部分的结合,而K201尽管与烷基部分有良好的相互作用,但对葡萄糖单元的结合更重要。E190、E194和K201这三个残基降低了对苯基部分的亲和力。此外,M453有利于寡糖型糖苷配基的第二个葡萄糖单元以及烷基型糖苷配基起始部分的结合。所研究的残基均未与烷基型糖苷配基的末端部分相互作用。还证明了E190、E194、K201和M453在稳定ES(双 dagger)方面有类似的贡献。它们与糖苷配基的相互作用单独比与糖基相互作用的残基形成的相互作用弱,但它们的联合催化作用相似。最后,这些与糖苷配基的相互作用不影响糖基的结合。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验