Farès Christophe, Sharom Frances J, Davis James H
Department of Physics, University of Guelph, Guelph, Ontario, N1G 2W1, Canada.
J Am Chem Soc. 2002 Sep 25;124(38):11232-3. doi: 10.1021/ja0264549.
We have studied gramicidin A, an environmentally sensitive polymorphic pentadecapeptide, fully 15N-labelled and dispersed in a highly deuterated phospholipid bilayer system. By submitting the sample to fast magic angle spinning, we were able to reduce the polypeptide amide hydrogen linewidths to 160 Hz, and hence to partially resolve them. By correlating these resonances with the 40 Hz wide dipolar coupled 15N in a 2D-CROPSY (cross-polarization spectroscopy) experiment, it was possible to observe the 20 partially overlapping 1H-15N signal pairs from the polypeptide backbone and sidechains. Both chemical shift distributions closely match those of the same peptide in SDS micelles, but only poorly match those of conformationally different gramicidin A in trifluoroethanol, dimethylsulfoxide, or methanol/chloroform mixture. Our results are indicative of the N-to-N right-handed beta6.3-helix conformation of gramicidin A and offer sufficient resolution to encourage development of experiments to measure orientational or distance restraints using through-space dipolar couplings.
我们研究了短杆菌肽A,一种对环境敏感的多态十五肽,其完全用15N标记并分散在高度氘化的磷脂双层体系中。通过对样品进行快速魔角旋转,我们能够将多肽酰胺氢线宽减小到160赫兹,从而部分分辨它们。通过在二维CROPSY(交叉极化光谱)实验中将这些共振与40赫兹宽的偶极耦合15N相关联,有可能观察到来自多肽主链和侧链的20对部分重叠的1H-15N信号对。两种化学位移分布都与该肽在SDS胶束中的分布紧密匹配,但与在三氟乙醇、二甲基亚砜或甲醇/氯仿混合物中构象不同的短杆菌肽A的分布匹配度较差。我们的结果表明短杆菌肽A具有从N到N的右手β6.3螺旋构象,并提供了足够的分辨率,以鼓励开展利用空间偶极耦合来测量取向或距离限制的实验。