Suppr超能文献

通过固态19F-NMR从角度和距离限制推导的抗微生物β-折叠肽短杆菌肽S的膜结合结构与排列

Membrane-bound structure and alignment of the antimicrobial beta-sheet peptide gramicidin S derived from angular and distance constraints by solid state 19F-NMR.

作者信息

Salgado J, Grage S L, Kondejewski L H, Hodges R S, McElhaney R N, Ulrich A S

机构信息

Department of Molecular Biology, University of Jena, Germany.

出版信息

J Biomol NMR. 2001 Nov;21(3):191-208. doi: 10.1023/a:1012946026231.

Abstract

The antimicrobial properties of the cyclic beta-sheet peptide gramicidin S are attributed to its destabilizing effect on lipid membranes. Here we present the membrane-bound structure and alignment of a derivative of this peptide, based on angular and distance constraints. Solid-state 19F-NMR was used to study a 19F-labelled gramicidin S analogue in dimyristoylphosphatidylcholine bilayers at a lipid:peptide ratio of 80:1 and above. Two equivalent leucine side chains were replaced by the non-natural amino acid 4F-phenylglycine, which serves as a highly sensitive reporter on the structure and dynamics of the peptide backbone. Using a modified CPMG multipulse sequence, the distance between the two 19F-labels was measured from their homonuclear dipolar coupling as 6 A. in good agreement with the known backbone structure of natural gramicidin S in solution. By analyzing the anisotropic chemical shift of the 19F-labels in macroscopically oriented membrane samples, we determined the alignment of the peptide in the bilayer and described its temperature-dependent mobility. In the gel phase, the 19F-labelled gramicidin S is aligned symmetrically with respect to the membrane normal, i.e., with its cyclic beta-sheet backbone lying flat in the plane of the bilayer, which is fully consistent with its amphiphilic character. Upon raising the temperature to the liquid crystalline state, a considerable narrowing of the 19F-NMR chemical shift dispersion is observed, which is attributed the onset of global rotation of the peptide and further wobbling motions. This study demonstrates the potential of the 19F nucleus to describe suitably labelled polypeptides in membranes, requiring only little material and short NMR acquisition times.

摘要

环β-折叠肽短杆菌肽S的抗菌特性归因于其对脂质膜的去稳定化作用。在此,我们基于角度和距离限制,展示了该肽衍生物的膜结合结构和排列。固态19F-NMR用于研究在脂质:肽比例为80:1及以上的二肉豆蔻酰磷脂酰胆碱双层膜中的19F标记的短杆菌肽S类似物。两个等效的亮氨酸侧链被非天然氨基酸4F-苯甘氨酸取代,该氨基酸可作为肽主链结构和动力学的高灵敏度报告基团。使用改进的CPMG多脉冲序列,从两个19F标记之间的同核偶极耦合测量出它们之间的距离为6 Å,这与溶液中天然短杆菌肽S的已知主链结构高度一致。通过分析宏观取向的膜样品中19F标记的各向异性化学位移,我们确定了肽在双层膜中的排列,并描述了其温度依赖性迁移率。在凝胶相中,19F标记的短杆菌肽S相对于膜法线对称排列,即其环状β-折叠主链平躺在双层膜平面内,这与其两亲性特征完全一致。当温度升高到液晶态时,观察到19F-NMR化学位移分散度显著变窄,这归因于肽的整体旋转和进一步的摆动运动的开始。这项研究证明了19F核在描述膜中适当标记的多肽方面的潜力,只需要很少的材料和较短的NMR采集时间。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验