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[欧亚大陆驼鹿(Alces alces L.)的遗传多样性]

[Genetic diversity of moose (Alces alces L.) in Eurasia].

作者信息

Udina I G, Danilkin A A, Boeskorov G G

机构信息

N. I. Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, 119991 Russia.

出版信息

Genetika. 2002 Aug;38(8):1125-32.

Abstract

Polymorphism of nucleotide sequence of D-loop fragment of the mitochondrial DNA was studied in 20 moose from several local populations on the territory of Eurasia. Three main haplotype variants of D-loop were detected by molecular phylogenetic method, which formed three clusters named European, Asian and American. Intraspecies variation in the length of HVSI of D-loop of the mitochondrial DNA of moose was revealed. In the Far Eastern and Yakutian moose, haplotypes with a 75-bp deletion were found, which were most similar with haplotypes (also with the deletion), earlier observed in North American moose [1]. The highest diversity of the haplotypes of mitochondrial DNA is characteristic of Yakutia and the Far East (where three haplotype variants were found), which demonstrates the probable role of the region as the center of the species or as the region of ancient population mixture. The geographic region might be considered as a probable source of ancient moose migrations from Asia to America, basing on the data of distribution of mitochondrial haplotypes of D-loop and alleles of MhcAlal-DRB1. Divergence of nucleotide sequences of haplotypes with the 75-bp deletion (forming the American cluster on the phylogenetic tree) was the lowest (0.4%), which evidences respectively recent origin of the group of haplotypes. In Europe, only haplotypes of mitochondrial DNA referred to European variant were observed. Basing on analysis of variation of nucleotide sequences of D-loop, exon 4 of kappa-Casein and exon 2 of MhcALal-DRB1, we demonstrated that Eurasian moose studied belong to the unique species, which has probably passed through a bottle neck. The time of the origin of modern diversity of D-loop haplotypes of the species was estimated as 0.075-0.15 Myr ago.

摘要

对欧亚大陆多个本地种群的20头驼鹿线粒体DNA的D-loop片段核苷酸序列多态性进行了研究。通过分子系统发育方法检测到D-loop的三种主要单倍型变体,它们形成了三个聚类,分别命名为欧洲、亚洲和美洲聚类。揭示了驼鹿线粒体DNA的D-loop高变区I(HVSI)长度的种内变异。在远东和雅库特驼鹿中,发现了具有75 bp缺失的单倍型,这些单倍型与之前在北美驼鹿中观察到的单倍型(也有该缺失)最为相似[1]。线粒体DNA单倍型的最高多样性特征是雅库特和远东地区(发现了三种单倍型变体),这表明该地区可能作为物种中心或古代种群混合区域发挥了作用。基于D-loop线粒体单倍型和MhcAlal-DRB1等位基因的分布数据,该地理区域可能被视为古代驼鹿从亚洲迁徙到美洲的可能来源。具有75 bp缺失的单倍型(在系统发育树上形成美洲聚类)的核苷酸序列分歧最低(0.4%),这分别证明了该单倍型组的近期起源。在欧洲,仅观察到属于欧洲变体的线粒体DNA单倍型。基于对D-loop核苷酸序列、κ-酪蛋白外显子4和MhcALal-DRB1外显子2变异的分析,我们证明所研究的欧亚驼鹿属于一个独特的物种,该物种可能经历过瓶颈效应。该物种D-loop单倍型现代多样性的起源时间估计为0.075 - 0.15百万年前。

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