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阿拉巴马州中部HFE C282Y纯合子血色素沉着症先证者中的HLA - A和 - B等位基因及单倍型

HLA-A and -B alleles and haplotypes in hemochromatosis probands with HFE C282Y homozygosity in central Alabama.

作者信息

Barton James C, Acton Ronald T

机构信息

Southern Iron Disorders Center, Birmingham, Alabama, USA.

出版信息

BMC Med Genet. 2002 Oct 7;3:9. doi: 10.1186/1471-2350-3-9.

Abstract

BACKGROUND

We wanted to quantify HLA-A and -B allele and haplotype frequencies in Alabama hemochromatosis probands with HFE C282Y homozygosity and controls, and to compare results to those in other populations.

METHODS

Alleles were detected using DNA-based typing (probands) and microlymphocytotoxicity (controls).

RESULTS

Alleles were determined in 139 probands (1,321 controls) and haplotypes in 118 probands (605 controls). In probands, A03 positivity was 0.7482 (0.2739 controls; p = or < 0.0001; odds ratio (OR) 7.9); positivity for B07, B14, and B56 was also increased. In probands, haplotypes A03-B07 and A03-B14 were more frequent (p < 0.0001, respectively; OR = 12.3 and 11.1, respectively). The haplotypes A01-B60, A02-B39, A02-B62, A03-B13, A03-B15, A03-B27, A03-B35, A03-B44, A03-B47, and A03-B57 were also significantly more frequent in probands. 37.3% of probands were HLA-haploidentical with other proband(s).

CONCLUSIONS

A03 and A03-B07 frequencies are increased in Alabama probands, as in other hemochromatosis cohorts. Increased absolute frequencies of A03-B35 have been reported only in the present Alabama probands and in hemochromatosis patients in Italy. Increased absolute frequencies of A01-B60, A02-B39, A02-B62, A03-B13, A03-B15, A03-B27, A03-B44, A03-B47, and A03-B*57 in hemochromatosis cohorts have not been reported previously.

摘要

背景

我们想要量化阿拉巴马州患有HFE C282Y纯合子的血色素沉着症先证者和对照组中HLA - A和 - B等位基因及单倍型频率,并将结果与其他人群进行比较。

方法

使用基于DNA的分型方法检测先证者的等位基因,使用微量淋巴细胞毒性试验检测对照组的等位基因。

结果

对139名先证者(1321名对照组)进行了等位基因检测,对118名先证者(605名对照组)进行了单倍型检测。在先证者中,A03阳性率为0.7482(对照组为0.2739;p≤0.0001;优势比(OR)为7.9);B07、B14和B56的阳性率也有所增加。在先证者中,单倍型A03 - B07和A03 - B14更为常见(p分别<0.0001;OR分别为12.3和11.1)。单倍型A01 - B60、A02 - B39、A02 - B62、A03 - B13、A03 - B15、A03 - B27、A03 - B35、A03 - B44、A03 - B47和A03 - B57在先证者中也显著更为常见。37.3%的先证者与其他先证者HLA单倍型相同。

结论

与其他血色素沉着症队列一样,阿拉巴马州先证者中A03和A03 - B07的频率增加。仅在目前的阿拉巴马州先证者和意大利的血色素沉着症患者中报道了A03 - B35绝对频率的增加。血色素沉着症队列中A01 - B60、A02 - B39、A02 - B62、A03 - B13、A03 - B15、A03 - B27、A03 - B44、A03 - B47和A03 - B*57绝对频率的增加此前尚未见报道。

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