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大肠杆菌插入序列IS150:通过环状和线性中间体进行转座

Escherichia coli insertion sequence IS150: transposition via circular and linear intermediates.

作者信息

Haas Markus, Rak Bodo

机构信息

Institut für Biologie III, Universität, Schänzlestrasse 1, D-79104 Freiburg, Germany.

出版信息

J Bacteriol. 2002 Nov;184(21):5833-41. doi: 10.1128/JB.184.21.5833-5841.2002.

Abstract

IS150, a member of the widespread IS3 family, contains two consecutive out-of-phase open reading frames, orfA and orfB, that partially overlap. These open reading frames encode three proteins, InsA, InsB, and the InsAB protein, which is jointly encoded by both open reading frames by means of programmed translational frameshifting. We demonstrate that the InsAB protein represents the IS150 element's transposase. In vivo, the wild-type IS150 element generates circular excision products and linear IS150 molecules. Circular and linear species have previously been detected with mutant derivatives of other members of the IS3 family. Our finding supports the assumption that these products represent true transposition intermediates of members of this family. Analysis of the molecular nature of these two species suggested that the circular forms are precursors of the linear molecules. Elimination of InsA synthesis within the otherwise intact element led to accumulation of large amounts of the linear species, indicating that the primary role of InsA may be to prevent abortive production of the linear species and to couple generation of these species to productive insertion events.

摘要

IS150是广泛存在的IS3家族的成员之一,含有两个连续的异相开放阅读框,即orfA和orfB,它们部分重叠。这些开放阅读框编码三种蛋白质,即InsA、InsB和InsAB蛋白,InsAB蛋白是由两个开放阅读框通过程序性翻译移码共同编码的。我们证明InsAB蛋白代表IS150元件的转座酶。在体内,野生型IS150元件产生环状切除产物和线性IS150分子。之前在IS3家族其他成员的突变衍生物中检测到了环状和线性形式。我们的发现支持了这些产物代表该家族成员真正转座中间体的假设。对这两种形式分子性质的分析表明,环状形式是线性分子的前体。在其他部分完整的元件中消除InsA的合成会导致大量线性形式的积累,这表明InsA的主要作用可能是防止线性形式的流产产生,并将这些形式的产生与有效插入事件联系起来。

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