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全基因组连锁扫描表明,有几个基因组区域可能包含影响身高变异的潜在数量性状基因座。

A whole-genome linkage scan suggests several genomic regions potentially containing QTLs underlying the variation of stature.

作者信息

Deng Hong-Wen, Xu Fu-Hua, Liu Yao-Zhong, Shen Hui, Deng Hongyi, Huang Qing-Yang, Liu Yong-Jun, Conway Theresa, Li Jin-Long, Davies K M, Recker Robert R

机构信息

Osteoporosis Research Center, Creighton University, Omaha, Nebraska 68131, USA.

出版信息

Am J Med Genet. 2002 Nov 15;113(1):29-39. doi: 10.1002/ajmg.10742.

Abstract

Human height is a complex trait under the control of both genetic and environment factors. In order to identify genomic regions underlying the variation of stature, we performed a whole-genome linkage analysis on a sample of 53 human pedigrees containing 1,249 sib pairs, 1,098 grandparent-grandchildren pairs, 1,993 avuncular pairs, and 1,172 first-cousin pairs. Several genomic regions were suggested by our study to be linked with human height variation. These regions include 5q31 at 144 cM from pter on chromosome 5 (with a maximum LOD score of 2.14 in multipoint linkage analyses), Xp22 at the marker DXS1060, and Xq25 at DXS1001 on the X chromosome (with LOD scores of 1.95 and 1.91, respectively, in two-point linkage analyses). Noticeably, Xp22 happens to be the very region where a newly identified gene underlying idiopathic short stature, SHOX, maps. Based on our findings, further confirmation and fine-mapping studies are to be pursued on expanded samples and/or with denser markers for eventual identification of major functional genes involved in human height variation.

摘要

人类身高是一种受遗传和环境因素共同控制的复杂性状。为了确定影响身高变异的基因组区域,我们对53个家系样本进行了全基因组连锁分析,这些家系包含1249对同胞、1098对祖孙、1993对叔侄和1172对堂兄弟姐妹。我们的研究表明,有几个基因组区域与人类身高变异有关。这些区域包括位于5号染色体上距短臂末端144厘摩处的5q31(多点连锁分析中最大对数优势分数为2.14)、X染色体上标记DXS1060所在的Xp22以及DXS1001所在的Xq25(两点连锁分析中对数优势分数分别为1.95和1.91)。值得注意的是,Xp22恰好是新发现的导致特发性身材矮小的基因SHOX所在的区域。基于我们的研究结果,需要对更大的样本和/或使用更密集的标记进行进一步的确认和精细定位研究,以最终确定参与人类身高变异的主要功能基因。

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