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三触角蛋白酶进行性蛋白质降解的结构基础。

Structural basis for the processive protein degradation by tricorn protease.

作者信息

Brandstetter Hans, Kim Jeong-Sun, Groll Michael, Göttig Peter, Huber Robert

机构信息

Abteilung Strukturforschung, Max-Planck-Institut für Biochemie, Martinsried, Germany.

出版信息

Biol Chem. 2002 Jul-Aug;383(7-8):1157-65. doi: 10.1515/BC.2002.127.

DOI:10.1515/BC.2002.127
PMID:12437101
Abstract

Cell survival critically depends on the efficient use of available resources. This includes both the clearance and the recycling of those protein components that have become futile or defective. Several proteins sequentially accomplish this complex task. The proteasome serves as an initial protein shredder and generates peptides of 7-12 amino acids in length. In general, these products are useless burden to the cell and need further processing. A few years ago, a proteolytic system was identified in the model organism Thermoplasma acidophilum which indeed performs this processing [Tamura et al., Science 274 (1996), 1385-1389]. The hexameric core protein of this modular system, referred to as tricorn protease, is a 720 kDa protease which is able to assemble further into a giant icosahedral capsid, as determined by electron microscopy. Recently, we determined the crystal structure of the tricorn core particle at 2.0 A resolution [Brandstetter et al., Nature 414 (2001), 466-469]. Here we describe the structural and mechanistic basis for tricorn's processive degradation mode, including a novel electrostatic substrate-to-product sink, and suggest how further components might interact with the tricorn protease to complete the cellular waste recycling process.

摘要

细胞的存活严重依赖于对可用资源的有效利用。这包括对那些已变得无用或有缺陷的蛋白质成分的清除和再循环。几种蛋白质依次完成这项复杂的任务。蛋白酶体充当最初的蛋白质切碎机,产生长度为7至12个氨基酸的肽段。一般来说,这些产物对细胞是无用的负担,需要进一步处理。几年前,在模式生物嗜热栖热菌中鉴定出一种蛋白水解系统,它确实能进行这种处理 [田村等人,《科学》274 (1996),1385 - 1389]。这个模块化系统的六聚体核心蛋白,被称为三触角蛋白酶,是一种720 kDa的蛋白酶,通过电子显微镜确定它能够进一步组装成一个巨大的二十面体衣壳。最近,我们以2.0 Å的分辨率确定了三触角核心颗粒的晶体结构 [布兰德施泰特等人,《自然》414 (2001),466 - 469]。在这里,我们描述了三触角蛋白酶连续降解模式的结构和机制基础,包括一种新的从底物到产物的静电汇聚机制,并提出其他成分可能如何与三触角蛋白酶相互作用以完成细胞废物再循环过程。

相似文献

1
Structural basis for the processive protein degradation by tricorn protease.三触角蛋白酶进行性蛋白质降解的结构基础。
Biol Chem. 2002 Jul-Aug;383(7-8):1157-65. doi: 10.1515/BC.2002.127.
2
Crystal structure of the tricorn protease reveals a protein disassembly line.三角蛋白酶的晶体结构揭示了一条蛋白质拆卸生产线。
Nature. 2001 Nov 22;414(6862):466-70. doi: 10.1038/35106609.
3
Capsids of tricorn protease studied by electron cryomicroscopy.通过电子冷冻显微镜对三角蛋白酶衣壳进行的研究。
J Struct Biol. 1999 Dec 1;128(1):65-8. doi: 10.1006/jsbi.1999.4169.
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Crystal structures of the tricorn interacting factor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations.嗜酸热原体中三触角相互作用因子F3(一种锌氨肽酶)的晶体结构,呈现三种不同构象。
J Mol Biol. 2005 Jun 17;349(4):787-800. doi: 10.1016/j.jmb.2005.03.070. Epub 2005 Apr 26.
5
Purification, crystallization, and preliminary X-ray diffraction analysis of the Tricorn protease hexamer from Thermoplasma acidophilum.嗜酸嗜热栖热菌三角蛋白酶六聚体的纯化、结晶及初步X射线衍射分析
J Struct Biol. 2001 Apr;134(1):83-7. doi: 10.1006/jsbi.2001.4360.
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Tricorn protease--the core of a modular proteolytic system.三棱蛋白酶——模块化蛋白水解系统的核心。
Science. 1996 Nov 22;274(5291):1385-9. doi: 10.1126/science.274.5291.1385.
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Tricorn protease exists as an icosahedral supermolecule in vivo.
Mol Cell. 1997 Dec;1(1):59-65. doi: 10.1016/s1097-2765(00)80007-6.
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Structures of the tricorn-interacting aminopeptidase F1 with different ligands explain its catalytic mechanism.三触角相互作用氨肽酶F1与不同配体的结构解释了其催化机制。
EMBO J. 2002 Oct 15;21(20):5343-52. doi: 10.1093/emboj/cdf552.
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X-ray snapshots of peptide processing in mutants of tricorn-interacting factor F1 from Thermoplasma acidophilum.嗜酸热原体中三触角相互作用因子F1突变体中肽加工的X射线快照。
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Crystal structure of TET protease reveals complementary protein degradation pathways in prokaryotes.TET蛋白酶的晶体结构揭示了原核生物中互补的蛋白质降解途径。
J Mol Biol. 2005 Mar 11;346(5):1207-19. doi: 10.1016/j.jmb.2004.12.056. Epub 2005 Jan 16.

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