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Y639F/H784A T7 RNA聚合酶双突变体在使用非标准NTP合成RNA方面表现出优异特性。

A Y639F/H784A T7 RNA polymerase double mutant displays superior properties for synthesizing RNAs with non-canonical NTPs.

作者信息

Padilla Robert, Sousa Rui

机构信息

Department of Biochemistry, University of Texas Health Science Center, 7703 Floyd Curl Drive, San Antonio, TX 78229-3900, USA.

出版信息

Nucleic Acids Res. 2002 Dec 15;30(24):e138. doi: 10.1093/nar/gnf138.

Abstract

A T7 RNA polymerase in which Tyr639 is mutated to Phe readily utilizes 2'-deoxy, 2'-NH2 and 2'-F NTPs as substrates and has been widely used to synthesize modified RNAs for a variety of applications. This mutant does not readily utilize NTPs with bulkier 2'-substituents, nor does it facilitate incorporation of NTPs with modifications at other positions. Introduction of a second mutation (H784A) into the Y639F background markedly enhances utilization of NTPs with bulky 2'-substituents (2'-OMe and 2'-N3), and may also enhance use of NTPs with modifications at other than the 2'-position. The Y639F/H784A double mutant may therefore be exceptionally useful for incorporation of a variety of non-canonical NMPs into RNA.

摘要

酪氨酸639突变为苯丙氨酸的T7 RNA聚合酶能够轻易地将2'-脱氧、2'-氨基和2'-氟核糖核苷三磷酸用作底物,并且已被广泛用于合成各种应用的修饰RNA。该突变体不易使用具有较大2'-取代基的核糖核苷三磷酸,也不利于掺入在其他位置具有修饰的核糖核苷三磷酸。在Y639F背景中引入第二个突变(H784A)可显著提高对具有较大2'-取代基(2'-甲氧基和2'-叠氮基)的核糖核苷三磷酸的利用率,并且还可能提高对2'-位以外具有修饰的核糖核苷三磷酸的使用。因此,Y639F/H784A双突变体对于将各种非规范的核糖核苷酸掺入RNA可能格外有用。

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本文引用的文献

2
Chemical probing of RNA by nucleotide analog interference mapping.
Methods Enzymol. 2000;317:92-109. doi: 10.1016/s0076-6879(00)17008-9.
3
Roles of histidine 784 and tyrosine 639 in ribose discrimination by T7 RNA polymerase.
Biochemistry. 2000 Feb 8;39(5):919-23. doi: 10.1021/bi992324+.
4
Structure of a transcribing T7 RNA polymerase initiation complex.
Science. 1999 Dec 17;286(5448):2305-9. doi: 10.1126/science.286.5448.2305.
6
A nuclease-resistant protein kinase C alpha ribozyme blocks glioma cell growth.
Nat Biotechnol. 1998 Jun;16(6):556-61. doi: 10.1038/nbt0698-556.
7
Mechanism of ribose 2'-group discrimination by an RNA polymerase.
Biochemistry. 1997 Jul 8;36(27):8231-42. doi: 10.1021/bi962674l.
8
A mutant T7 RNA polymerase as a DNA polymerase.
EMBO J. 1995 Sep 15;14(18):4609-21. doi: 10.1002/j.1460-2075.1995.tb00140.x.
9
Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates.
Nucleic Acids Res. 1987 Nov 11;15(21):8783-98. doi: 10.1093/nar/15.21.8783.
10
A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes.
Proc Natl Acad Sci U S A. 1985 Feb;82(4):1074-8. doi: 10.1073/pnas.82.4.1074.

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