蛋白质家族中氢键特征模式的检测。
Detection of hydrogen-bond signature patterns in protein families.
作者信息
Prasad Tejasvini, Prathima M N, Chandra Nagasuma
机构信息
Bioinformatics Centre, Supercomputer Education and Research Centre, Indian Institute of Science, Bangalore 560012, India.
出版信息
Bioinformatics. 2003 Jan;19(1):167-8. doi: 10.1093/bioinformatics/19.1.167.
SUMMARY
We have developed a WWW server, HBPRINT, for the identification of hydrogen-bond signature patterns in protein families from their structures. The server calculates (a) common hydrogen bonds between two structures (b) a hydrogen-bond fingerprint in a set of structural neighbours and (c) details of conserved hydrogen bonds. The server also enables the visualization of the hydrogen bond network comprising the signature pattern.
AVAILABILITY
HBPRINT and a tutorial are available from http://144.16.93.115/hb_page/index.html.
摘要
我们开发了一个万维网服务器HBPRINT，用于从蛋白质家族的结构中识别氢键特征模式。该服务器可计算：（a）两个结构之间的共有氢键；（b）一组结构邻域中的氢键指纹；以及（c）保守氢键的详细信息。该服务器还能可视化包含特征模式的氢键网络。
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