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OB折叠结构域:序列、结构和功能进化的一个快照

OB-fold domains: a snapshot of the evolution of sequence, structure and function.

作者信息

Arcus Vickery

机构信息

AgResearch Laboratory for Structural Biology, School of Biological Sciences, University of Auckland, Private Bag 92-019, New Zealand.

出版信息

Curr Opin Struct Biol. 2002 Dec;12(6):794-801. doi: 10.1016/s0959-440x(02)00392-5.

Abstract

The OB-fold is found in all three kingdoms and is well represented in both sequence and structural databases. The OB-fold is a five-stranded closed beta barrel and the majority of OB-fold proteins use the same face for ligand binding or as an active site. Different OB-fold proteins use this 'fold-related binding face' to, variously, bind oligosaccharides, oligonucleotides, proteins, metal ions and catalytic substrates. Recently, a number of new structures with OB-folds have been reported that augment the variation seen for this set of proteins whilst conserving the characteristic fold and binding face. The conservation of fold and a functional binding face amongst many structures provides a model for investigating the evolutionary trajectory of sequence, structure and function.

摘要

OB折叠存在于所有三个生物界,并且在序列数据库和结构数据库中都有很好的体现。OB折叠是一种由五条链组成的封闭β桶结构,大多数OB折叠蛋白利用同一面进行配体结合或作为活性位点。不同的OB折叠蛋白利用这个“与折叠相关的结合面”来分别结合寡糖、寡核苷酸、蛋白质、金属离子和催化底物。最近,已经报道了一些具有OB折叠的新结构,这些结构增加了这组蛋白质的多样性,同时保留了特征性的折叠和结合面。许多结构中折叠和功能性结合面的保守性为研究序列、结构和功能的进化轨迹提供了一个模型。

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