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[与水稻细胞质雄性不育相关片段的克隆与测序]

[Cloning and sequencing of fragments associated with cytoplasm male sterility of rice].

作者信息

Yang Jian-Bo, Wang Xiu-Feng, Zhao Cheng-Song, Xiang Tai-He, Li Li

机构信息

Key Lab of Rice Genetics and Breeding, Ministry of Agriculture, Anhui Academy of Agricultural Sciences, Hefei 230031, China.

出版信息

Yi Chuan Xue Bao. 2002 Sep;29(9):808-13.

PMID:12561229
Abstract

Mitochorndrial DNA (mtDNA), nuclear DNA (nDNA), and genomic DNA (gDNA) were individually extracted from Zhenshan 97A, Xieqingzao A and A-23, which were cytoplasmic male sterile (wild abortive, dwarf abortive and BT), and from Zhenshan 97B, Xieqingzao B and BT, which were maintainers lines. Each of them was analyzed with 500 random primers by RAPD. Six fragments specific to male sterile lines were amplified. A fragment, PWH-17, associated with wild and dwarf abortive type cytoplasmic male sterility was analyzed by Southern blotting and sequencing, and also tested by SCAR. It was 1879 bp in length, which contained 6 open reading frames and 8 repeated sequences. BLAST search revealed that partial sequence in PWH-17 showed high similarity to the upstream sequence of tRNA-Asp gene in Elytrigia elongate (GenBank accession number U14335) and wheat (X13243). The similarity ratios were 97% and 100%. It was inferred that the possible position of PWH-17 in rice (wild abortive) could be located between tRNA-Asp and Cox II, which will be discussed further.

摘要

从野败型细胞质雄性不育系珍汕97A、协青早A和A - 23,以及保持系珍汕97B、协青早B和BT中分别提取线粒体DNA(mtDNA)、核DNA(nDNA)和基因组DNA(gDNA)。采用随机扩增多态性DNA(RAPD)技术,用500个随机引物对上述材料进行分析,扩增出6条雄性不育系特异片段。对其中一条与野败型和矮败型细胞质雄性不育相关的片段PWH - 17进行Southern杂交、测序及序列特异性扩增区域(SCAR)分析。该片段长1879 bp,含有6个开放阅读框和8个重复序列。BLAST检索结果表明,PWH - 17的部分序列与长穗偃麦草(GenBank登录号U14335)和小麦(X13243)中天冬氨酸tRNA基因上游序列高度相似,相似率分别为97%和100%。推测PWH - 17在水稻(野败型)中的可能位置位于天冬氨酸tRNA和细胞色素氧化酶II(Cox II)之间,对此将作进一步讨论。

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