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本文引用的文献

1
Energetic and conformational aspects of A:T base-pair opening within the DNA double helix.
Chemphyschem. 2001 Nov 19;2(11):673-7. doi: 10.1002/1439-7641(20011119)2:11<673::AID-CPHC673>3.0.CO;2-S.
2
Base flipping in DNA: pathways and energetics studied with molecular dynamic simulations.
J Am Chem Soc. 2002 Jun 26;124(25):7272-3. doi: 10.1021/ja025980x.
3
Free energy and structural pathways of base flipping in a DNA GCGC containing sequence.
J Mol Biol. 2002 May 24;319(1):141-60. doi: 10.1016/S0022-2836(02)00194-8.
5
New insights into the structure of abasic DNA from molecular dynamics simulations.
Nucleic Acids Res. 2000 Jul 1;28(13):2613-26. doi: 10.1093/nar/28.13.2613.
6
A structural snapshot of base-pair opening in DNA.
Proc Natl Acad Sci U S A. 1999 Oct 12;96(21):11809-14. doi: 10.1073/pnas.96.21.11809.
7
A modified version of the Cornell et al. force field with improved sugar pucker phases and helical repeat.
J Biomol Struct Dyn. 1999 Feb;16(4):845-62. doi: 10.1080/07391102.1999.10508297.
8
High base pair opening rates in tracts of GC base pairs.
J Biol Chem. 1999 Mar 12;274(11):6957-62. doi: 10.1074/jbc.274.11.6957.
10
DNA curvature and deformation in protein-DNA complexes: a step in the right direction.
Proc Natl Acad Sci U S A. 1998 Dec 22;95(26):15163-5. doi: 10.1073/pnas.95.26.15163.

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