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GroEL-GroES-(ADP)7伴侣蛋白中的隐藏秩序:结构、折叠与ADP结合位点

Hidden order in the GroEL-GroES-(ADP)7 chaperonin: forms, folding, and ADP-binding sites.

作者信息

Janner A

机构信息

Institute for Theoretical Physics, University of Nijmegen, Toernooiveld, Nijmegen, The Netherlands.

出版信息

Proteins. 2003 Apr 1;51(1):126-36. doi: 10.1002/prot.10337.

Abstract

A molecular crystallography approach reveals the existence of a hidden order in GroEL-GroES-(ADP)(7). The new crystallographic symmetry concepts required are first illustrated for a hypothetical planar molecule. Their application to the chaperonin complex leads to molecular forms with vertices having integral coordinates (the indices) with respect to a symmetry-adapted basis and to folding points approximated by ideal C(alpha) positions with rational indices connected by integral scale-rotations, just as for the vertices of the molecular forms. The Mg(+2)-ions at nucleotide binding sites are symmetry-related in a similar way to C(alpha)'s folding points.

摘要

一种分子晶体学方法揭示了GroEL - GroES - (ADP)₇中隐藏序的存在。首先针对一个假设的平面分子说明了所需的新晶体学对称概念。将这些概念应用于伴侣蛋白复合物会产生分子形式,其顶点相对于对称适配基具有整数坐标(指标),并且折叠点由具有有理指标的理想Cα位置近似,这些位置通过整数比例旋转相连,就如同分子形式的顶点一样。核苷酸结合位点处的Mg²⁺离子与Cα的折叠点以类似方式对称相关。

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