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由液-液相分离决定的蛋白质聚集的时间尺度。

Time scale of protein aggregation dictated by liquid-liquid demixing.

作者信息

Vaiana S M, Palma-Vittorelli M B, Palma M U

机构信息

INFM Unit at the Department of Physical and Astronomical Sciences, University of Palermo, Palermo, Italy.

出版信息

Proteins. 2003 Apr 1;51(1):147-53. doi: 10.1002/prot.10306.

Abstract

The growing impact of protein aggregation pathologies, together with the current high need for extensive information on protein structures are focusing much interest on the physics underlying the nucleation and growth of protein aggregates and crystals. Sickle Cell Hemoglobin (HbS), a point-mutant form of normal human Hemoglobin (HbA), is the first recognized and best-studied case of pathologically aggregating protein. Here we reanalyze kinetic data on nucleation of deoxy-HbS aggregates by referring them to the (concentration-dependent) temperature T(s) characterizing the occurrence of the phase transition of liquid-liquid demixing (LLD) of the solution. In this way, and by appropriate scaling of kinetic data at different concentrations, so as to normalize their spans, the apparently disparate sets of data are seen to fall on a master curve. Expressing the master curve vs. the parameter epsilon = (T - T(s)) / T(s), familiar from phase transition theory, allows eliciting the role of anomalously large concentration fluctuations associated with the LLD phase transition and also allows decoupling quantitatively the role of such fluctuations from that of microscopic, inter-protein interactions leading to nucleation. Referring to epsilon shows how in a narrow temperature span, that is at T - T(s), nucleation kinetics can undergo orders-of-magnitude changes, unexpected in terms of ordinary chemical kinetics. The same is true for similarly small changes of other parameters (pH, salts, precipitants), capable of altering T(s) and consequently epsilon. This offers the rationale for understanding how apparently minor changes of parameters can dramatically affect protein aggregation and related diseases.

摘要

蛋白质聚集病变的影响日益增大,加之当前对蛋白质结构广泛信息的迫切需求,使得人们对蛋白质聚集体和晶体成核与生长背后的物理机制极为关注。镰状细胞血红蛋白(HbS)是正常人血红蛋白(HbA)的一种点突变形式,是首个被确认且研究最深入的病理性聚集蛋白质案例。在此,我们通过将脱氧 - HbS聚集体的成核动力学数据与表征溶液液 - 液 demixing(LLD)相变发生的(浓度依赖性)温度T(s)相关联,重新分析这些数据。通过这种方式,并对不同浓度下的动力学数据进行适当缩放,以归一化其跨度,可发现明显不同的数据集落在一条主曲线上。将主曲线表示为与相变理论中熟知的参数ε = (T - T(s)) / T(s)的关系,能够揭示与LLD相变相关的异常大浓度波动的作用,还能定量地将此类波动的作用与导致成核的微观蛋白质间相互作用的作用解耦。参考ε表明,在一个狭窄的温度范围内,即在T - T(s)时,成核动力学可能会发生几个数量级的变化,这在普通化学动力学中是意想不到的。对于其他能够改变T(s)进而改变ε的参数(pH、盐、沉淀剂)的类似小变化,情况也是如此。这为理解参数的明显微小变化如何能显著影响蛋白质聚集及相关疾病提供了理论依据。

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