Suppr超能文献

杂环芳基取代基对生长抑素受体两个不同位点结合亲和力的影响。与取代基静电势的相关性。

Effects of heterocyclic aromatic substituents on binding affinities at two distinct sites of somatostatin receptors. Correlation with the electrostatic potential of the substituents.

作者信息

Prasad Vidya, Birzin Elizabeth T, McVaugh Cheryl T, Van Rijn Rachel D, Rohrer Susan P, Chicchi Gary, Underwood Dennis J, Thornton Edward R, Smith Amos B, Hirschmann Ralph

机构信息

Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

出版信息

J Med Chem. 2003 May 8;46(10):1858-69. doi: 10.1021/jm0205088.

Abstract

In our continuing program exploring glucose-based peptidomimetics of somatostatin (SRIF-14), we sought to improve the water solubility of our glycosides. This led to insights into the nature of the ligand binding sites at the SRIF receptor. Replacement of the C4 benzyl substituent in glucoside (+)-2 with pyridinylmethyl or pyrazin-2-ylmethyl congeners increased water solubility and enhanced affinity for the human SRIF subtype receptor 4 (sst4). We attribute this effect to hydrogen bond formation. The pyridin-3-ylmethyl substituent at C4, when combined with the imidazol-4-ylmethyl group at C2, generated (-)-19, which has the highest affinity of a glucose-based peptidomimetic at a human SRIF receptor to date (K(i) 53 +/- 23 nM, n = 6 at sst4). The C4 heterocyclic congeners of glucosides bearing a 1-methoxy substituent rather than an indole side chain at the anomeric carbon, such as (+)-16, also provided information about the Trp(8) binding pocket. We correlated the SARs at both the C4 and the Trp(8) binding pockets with calculations of the electrostatic potentials of the diverse C4 aromatic substituents using Spartan 3-21G() MO analysis. These calculations provide an approximate analysis of a molecule's ability to interact within a receptor binding site. Our binding studies show that benzene and indole rings, but not pyridinylmethyl nor pyrazin-2-ylmethyl rings, can bind the hydrophobic Trp(8) binding pocket of sst4. The Spartan 3-21G() MO analysis reveals significant negative electrostatic potential in the region of the pi-clouds for the benzene and indole rings but not for the pyridinylmethyl or pyrazin-2-ylmethyl congeners. Our data further demonstrate that the replacement of benzene or indole side chains by heterocyclic aromatic rings typified by pyridine and pyrazine not only enhances water solubility and hydrogen bonding capacity as expected, but can also profoundly diminish the ability of the pi-cloud of the aromatic substituent to interact with side chains of an aromatic binding pocket such as that for Trp(8) of SRIF-14. Conversely, these calculations accommodate the experimental findings that pyrazin-2-ylmethyl and pyridinylmethyl substituents at C4- of C1-indole-substituted glycosides afford higher affinities at sst4 than the C4-benzyl group of (+)-2. This result is consistent with the high electron density in the plane of the heterocycle depicted in Figure 6 which can accept hydrogen bonds from the C4 binding pocket of the receptor. Unexpectedly, we found that the 2-fluoropyridin-5-ylmethyl analogue (+)-14 more closely resembles the binding affinity of (+)-8 than that of (+)-2, thus suggesting that (+)-14 represents a rare example of a carbon linked fluorine atom acting as a hydrogen bond acceptor. We attribute this result to the ability of the proton to bind the nitrogen and fluorine atoms simultaneously in a bifurcated arrangement. At the NK1 receptor of substance P (SP), the free hydroxyl at C4 optimizes affinity.

摘要

在我们持续探索基于葡萄糖的生长抑素(SRIF-14)拟肽的项目中,我们试图提高糖苷的水溶性。这使我们深入了解了SRIF受体上配体结合位点的性质。用吡啶基甲基或吡嗪-2-基甲基类似物取代糖苷(+)-2中的C4苄基取代基,增加了水溶性并增强了对人SRIF亚型受体4(sst4)的亲和力。我们将这种效应归因于氢键的形成。C4处的吡啶-3-基甲基取代基与C2处的咪唑-4-基甲基基团结合,生成了(-)-19,它是迄今为止基于葡萄糖的拟肽在人SRIF受体上具有最高亲和力的化合物(在sst4上的K(i)为53±23 nM,n = 6)。在异头碳上带有1-甲氧基取代基而非吲哚侧链的糖苷的C4杂环类似物,如(+)-16,也提供了有关Trp(8)结合口袋的信息。我们使用Spartan 3-21G()分子轨道分析,将C4和Trp(8)结合口袋处的构效关系与不同C4芳香取代基的静电势计算相关联。这些计算提供了对分子在受体结合位点内相互作用能力的近似分析。我们的结合研究表明,苯环和吲哚环,但不是吡啶基甲基环和吡嗪-2-基甲基环,可以结合sst4的疏水Trp(8)结合口袋。Spartan 3-21G()分子轨道分析显示,苯环和吲哚环的π电子云区域存在显著的负静电势,而吡啶基甲基或吡嗪-2-基甲基类似物则没有。我们的数据进一步证明,用吡啶和吡嗪代表的杂环芳香环取代苯环或吲哚侧链,不仅如预期的那样提高了水溶性和氢键结合能力,而且还能显著降低芳香取代基的π电子云与芳香结合口袋(如SRIF-14的Trp(8))侧链相互作用的能力。相反,这些计算与实验结果相符,即C1-吲哚取代糖苷的C4处的吡嗪-2-基甲基和吡啶基甲基取代基在sst4上的亲和力高于(+)-2的C4-苄基。该结果与图6所示杂环平面中的高电子密度一致,该高电子密度可以接受来自受体C4结合口袋的氢键。出乎意料的是,我们发现2-氟吡啶-5-基甲基类似物(+)-14的结合亲和力更接近(+)-8而非(+)-2,因此表明(+)-14是碳连接的氟原子作为氢键受体的罕见例子。我们将此结果归因于质子以分叉排列同时结合氮和氟原子的能力。在P物质(SP)的NK1受体上,C4处的游离羟基优化了亲和力。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验