Dey Raja, Roychowdhury Priyobroto
Department of Physics, University of Calcutta, 92 A.P.C. Road, 700009, Calcutta, India.
J Mol Model. 2003 Jun;9(3):183-9. doi: 10.1007/s00894-003-0130-4. Epub 2003 May 6.
Corticosteroid binding globulin (CBG) and thyroxin binding globulin (TBG) both belong to the same SERPIN superfamily of serine-proteinase inhibitors but in the course of evolution CBG has adapted to its new role as a transport agent of insoluble hormones. CBG binds corticosteroids in plasma, delivering them to sites of inflammation to modify the inflammatory response. CBG is an effective drug carrier for genetic manipulation, and hence there is immense biological interest in the location of the hormone binding site. The crystal structure of human CBG (hCBG) has not been determined, but sequence alignment with other SERPINs suggests that it conforms as a whole to the tertiary structure shared by the superfamily. Human CBG shares 52.15% and 55.50% sequence similarity with alpha1-antitrypsin and alpha1-antichymotrypsin, respectively. Multiple sequence alignment among the three sequences shows 73 conserved regions. The molecular structures of alpha1-antitrypsin and alpha1-antichymotrypsin, the archetype of the SERPIN superfamily, obtained by X-ray diffraction methods are used to develop a homology model of hCBG. Energy minimization was applied to the model to refine the structure further. The homology model of hCBG contains 371 residues (His13 to Val383 ). The secondary structure comprises 11 helices, 15 turns and 11 sheets. The putative corticosteroid binding region is found to exist in a pocket between beta-sheets S4, S10, S11 and alpha helix H10. Both cortisol and aldosterone are docked to the elongated hydrophobic ligand binding pocket with the polar residues at the two extremities. A difference accessible surface area (DASA) study revealed that cortisol binds with the native hCBG more tightly than aldosterone. Cleavage at the Val379-Met380 peptide bond causes a deformation of hCBG (also revealed through a DASA study). This deformation could probably trigger the release of the bound hormone. Figure Stereoscopic view of the ribbon diagram of hCBG complexed with cortisol. The bound cortisol is shown in space filling model in blue. Helices and sheets are shown in red and magenta respectively. Turns are shown in yellow.
皮质类固醇结合球蛋白(CBG)和甲状腺素结合球蛋白(TBG)都属于丝氨酸蛋白酶抑制剂的同一丝氨酸蛋白酶抑制剂超家族(SERPIN),但在进化过程中,CBG已适应其作为不溶性激素转运剂的新角色。CBG在血浆中结合皮质类固醇,将它们输送到炎症部位以改变炎症反应。CBG是用于基因操作的有效药物载体,因此对激素结合位点的定位具有极大的生物学兴趣。人CBG(hCBG)的晶体结构尚未确定,但与其他丝氨酸蛋白酶抑制剂的序列比对表明,它整体上符合该超家族共有的三级结构。人CBG与α1-抗胰蛋白酶和α1-抗糜蛋白酶的序列相似性分别为52.15%和55.50%。这三个序列之间的多序列比对显示有73个保守区域。通过X射线衍射方法获得的丝氨酸蛋白酶抑制剂超家族原型α1-抗胰蛋白酶和α1-抗糜蛋白酶的分子结构被用于构建hCBG的同源模型。对该模型应用能量最小化以进一步优化结构。hCBG的同源模型包含371个残基(His13至Val383)。二级结构包括11个螺旋、15个转角和11个片层。推测的皮质类固醇结合区域存在于β-片层S4、S10、S11和α-螺旋H10之间的一个口袋中。皮质醇和醛固酮都与细长的疏水性配体结合口袋对接,极性残基位于两端。差异可及表面积(DASA)研究表明,皮质醇与天然hCBG的结合比醛固酮更紧密。在Val379-Met380肽键处的切割会导致hCBG变形(DASA研究也揭示了这一点)。这种变形可能会触发结合激素的释放。图hCBG与皮质醇复合的带状图的立体视图。结合的皮质醇以蓝色空间填充模型显示。螺旋和片层分别以红色和品红色显示。转角以黄色显示。