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预测药物和化学物质引发有害影响的互联网实验室——进展报告

Internet laboratory for predicting harmful effects triggered by drugs and chemicals--a progress report.

作者信息

Vedani Angelo, Dobler Max, Lill Markus A

机构信息

Biographics Laboratory 3R, CH-Basel.

出版信息

ALTEX. 2003;20(2):85-91.

Abstract

The main objective of our institution is to establish a virtual laboratory on the Internet to allow for a reliable in silico estimation of harmful effects triggered by drugs, chemicals and their metabolites. In the past two years, we have compiled a pilot system including the 3D models of five receptors known to mediate adverse effects (the Ah, 5HT(2A), cannabinoid, GABA(A), and estrogen receptor, respectively) and tested them against 280 compounds (drugs, chemicals, toxins). Within this set-up we could demonstrate that our concept is able to both recognise toxic compounds substantially different from those used in the training set as well as to classify harmless compounds clearly as being non-toxic at low-level doses. This suggests that our approach can be used for the prediction of adverse effects of drug molecules and chemicals. It is the aim to provide free access to this 3D data base, particularly to universities, hospitals and regulatory bodies as it bears a significant potential to recognise hazardous compounds early in the development process and withdraw them from the evaluation pipeline. Hence, for substances recognised as hazardous in silico, subsequent toxicity tests involving animal models become obsolete.

摘要

我们机构的主要目标是在互联网上建立一个虚拟实验室,以便对药物、化学物质及其代谢产物引发的有害影响进行可靠的计算机模拟评估。在过去两年里,我们编制了一个试验系统,其中包括已知介导不良反应的五种受体的三维模型(分别为芳烃受体、5-羟色胺2A受体、大麻素受体、γ-氨基丁酸A受体和雌激素受体),并针对280种化合物(药物、化学物质、毒素)对其进行了测试。在这个设置中,我们能够证明我们的概念既能够识别与训练集中使用的化合物有很大不同的有毒化合物,也能够在低剂量下明确地将无害化合物归类为无毒。这表明我们的方法可用于预测药物分子和化学物质的不良反应。我们的目标是提供对这个三维数据库的免费访问,特别是向大学、医院和监管机构提供,因为它在识别开发过程早期的有害化合物并将其从评估流程中撤出方面具有巨大潜力。因此,对于在计算机模拟中被识别为有害的物质,随后涉及动物模型的毒性测试就变得过时了。

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