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从大鼠中分离出的泰勒样病毒的基因分析。

Genetic analysis of a Theiler-like virus isolated from rats.

作者信息

Ohsawa Kazutaka, Watanabe Yoji, Miyata Hironori, Sato Hiroshi

机构信息

Laboratory Animal Center for Biomedical Research, Nagasaki University School of Medicine 1-12-4 Sakamoto, Nagasaki, 855-858, Japan.

出版信息

Comp Med. 2003 Apr;53(2):191-6.

Abstract

Although cardioviruses related to Theiler's murine encephalomyelitis virus (TMEV) appear to be common in mice and rats, few TMEV isolates have been obtained from rat colonies. In 1991, a cardiovirus isolate designated NGS910 was obtained from sentinel rats exposed to cage bedding previously used by adult rats that were TMEV seropositive, but had never manifested clinical signs of disease. To determine to which group and subgroup of cardiovirus this virus belongs, the sequence of the viral genome was determined. The NGS910 genome consisted of 8,021 nucleotides and the 5'-nontranslated region had a predicted secondary structure that is similar to members of the TMEV group of cardioviruses. The Leader-P3D open reading frame (L ORF) of NGS910 had strong homology with L ORFs of other TMEVs (72% identity), but lower homology with EMCV cardioviruses (55 to 56%). Phylogenetic analyses on the basis of aligned nucleotide sequences of the L ORF (6,924 b) and the internal L* ORF (471 b) supported this classification of NGS910 as a TMEV strain. However, within the TMEV group, NGS910 wassufficiently divergent from other isolates that it could not be regarded as simply a mutant strain of a known TMEV. As genetic distances between NGS910 and other TMEVs were greater than those between Mengo virus of EMCV and other EMCVs, we propose to designate the NGS910 isolate as a rat Theiler-like virus.

摘要

尽管与泰勒氏小鼠脑脊髓炎病毒(TMEV)相关的心病毒似乎在小鼠和大鼠中很常见,但从大鼠群体中获得的TMEV分离株却很少。1991年,从哨兵大鼠中获得了一种名为NGS910的心病毒分离株,这些哨兵大鼠接触过先前由TMEV血清阳性但从未表现出疾病临床症状的成年大鼠使用过的笼垫。为了确定该病毒属于心病毒的哪个组和亚组,测定了病毒基因组的序列。NGS910基因组由8021个核苷酸组成,其5'-非翻译区具有预测的二级结构,与心病毒TMEV组的成员相似。NGS910的前导-P3D开放阅读框(L ORF)与其他TMEV的L ORF具有很强的同源性(72%的同一性),但与脑心肌炎病毒(EMCV)心病毒的同源性较低(55%至56%)。基于L ORF(6924 b)和内部L* ORF(471 b)的比对核苷酸序列进行的系统发育分析支持将NGS910分类为TMEV毒株。然而,在TMEV组内,NGS910与其他分离株的差异足够大,以至于不能简单地将其视为已知TMEV的突变株。由于NGS910与其他TMEV之间的遗传距离大于EMCV的门戈病毒与其他EMCV之间的遗传距离,我们建议将NGS910分离株命名为大鼠泰勒样病毒。

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