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北大西洋深海蟹(雪蟹属)种内和种间的基因差异。

Genetic differences within and between species of deep-sea crabs (chaceon) from the North Atlantic Ocean.

作者信息

Weinberg James R, Dahlgren Thomas G, Trowbridge Nan, Halanych Kenneth M

机构信息

National Marine Fisheries Service, 166 Water Street, Woods Hole, Massachusetts 02543, USA.

出版信息

Biol Bull. 2003 Jun;204(3):318-26. doi: 10.2307/1543602.

Abstract

The deep-sea red crab Chaceon quinquedens is a commercially important crustacean on the Atlantic continental shelf and slope of North America. To assess genetic subdivision in C. quinquedens, we examined the nucleotide sequence of the mitochondrial 16S rDNA gene and the internal transcribed spacers (ITS) of the nuclear ribosomal repeat in samples from southern New England and the Gulf of Mexico. We compared those data to sequences from two congeners, a sympatric species from the Florida coast, C. fenneri, and an allopatric eastern Atlantic species, C. affinis. The 16S rDNA data consisted of 379 aligned nucleotides obtained from 37 individuals. The greatest genetic difference among geographical groups or nominal species was between C. quinquedens from southern New England and C. quinquedens from the Gulf of Mexico. Haplotypes from these two groups had a minimum of 10 differences. All 11 C. fenneri samples matched the most common haplotype found in C. quinquedens from the Gulf of Mexico, and this haplotype was not detected in C. quinquedens from southern New England. The three haplotypes of C. affinis were unique to that recognized species, but those haplotypes differed only slightly from those of C. fenneri and C. quinquedens from the Gulf of Mexico. Based on 16S rDNA and ITS data, genetic differences between C. quinquedens from southern New England and the Gulf of Mexico are large enough to conclude that these are different fishery stocks. Our results also indicate that the designation of morphological species within the commercially important genus Chaceon is not congruent with evolutionary history. The genetic similarity of C. affinis from the eastern Atlantic and C. quinquedens from the Gulf of Mexico suggests these trans-Atlantic taxa share a more recent common history than the two populations of "C. quinquedens" that we examined.

摘要

深海红蟹(Chaceon quinquedens)是北美大西洋大陆架和大陆坡上具有重要商业价值的甲壳类动物。为了评估C. quinquedens的遗传细分情况,我们检测了来自新英格兰南部和墨西哥湾样本中线粒体16S rDNA基因的核苷酸序列以及核糖体重复序列的内部转录间隔区(ITS)。我们将这些数据与来自两个同属物种的序列进行了比较,一个是来自佛罗里达海岸的同域物种C. fenneri,另一个是异域分布的东大西洋物种C. affinis。16S rDNA数据由从37个个体中获得的379个比对核苷酸组成。地理群体或名义物种之间最大的遗传差异存在于新英格兰南部的C. quinquedens和墨西哥湾的C. quinquedens之间。这两个群体的单倍型至少有10个差异。所有11个C. fenneri样本与在墨西哥湾的C. quinquedens中发现的最常见单倍型匹配,而在新英格兰南部的C. quinquedens中未检测到这种单倍型。C. affinis的三种单倍型是该公认物种所特有的,但这些单倍型与来自墨西哥湾的C. fenneri和C. quinquedens的单倍型仅略有不同。基于16S rDNA和ITS数据,新英格兰南部和墨西哥湾的C. quinquedens之间的遗传差异足够大,可以得出结论,它们是不同的渔业种群。我们的结果还表明,在具有重要商业价值的Chaceon属内,形态物种的划分与进化历史不一致。来自东大西洋的C. affinis和来自墨西哥湾的C. quinquedens的遗传相似性表明,这些跨大西洋的分类单元共享的共同历史比我们研究的两个“C. quinquedens”种群更近。

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