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胰岛素组装抑制构象波动:天然状态和纤维中酰胺I线宽的拉曼分析。

Insulin assembly damps conformational fluctuations: Raman analysis of amide I linewidths in native states and fibrils.

作者信息

Dong Jian, Wan Zhuli, Popov Maxim, Carey Paul R, Weiss Michael A

机构信息

Department of Biochemistry, Case Western Reserve University School of Medicine, 10900 Euclid Avenue SOM-W427, Cleveland, OH 44106-4935, USA.

出版信息

J Mol Biol. 2003 Jul 4;330(2):431-42. doi: 10.1016/s0022-2836(03)00536-9.

Abstract

The crystal structure of insulin has been investigated in a variety of dimeric and hexameric assemblies. Interest in dynamics has been stimulated by conformational variability among crystal forms and evidence suggesting that the functional monomer undergoes a conformational change on receptor binding. Here, we employ Raman spectroscopy and Raman microscopy to investigate well-defined oligomeric species: monomeric and dimeric analogs in solution, native T(6) and R(6) hexamers in solution and corresponding polycrystalline samples. Remarkably, linewidths of Raman bands associated with the polypeptide backbone (amide I) exhibit progressive narrowing with successive self-assembly. Whereas dimerization damps fluctuations at an intermolecular beta-sheet, deconvolution of the amide I band indicates that formation of hexamers stabilizes both helical and non-helical elements. Although the structure of a monomer in solution resembles a crystallographic protomer, its encagement in a native assembly damps main-chain fluctuations. Further narrowing of a beta-sheet-specific amide I band is observed on reorganization of insulin in a cross-beta fibril. Enhanced flexibility of the native insulin monomer is in accord with molecular dynamics simulations. Such conformational fluctuations may initiate formation of an amyloidogenic nucleus and enable induced fit on receptor binding.

摘要

胰岛素的晶体结构已在多种二聚体和六聚体组装体中进行了研究。晶体形式之间的构象变异性以及表明功能性单体在受体结合时会发生构象变化的证据激发了人们对动力学的兴趣。在这里,我们采用拉曼光谱和拉曼显微镜来研究明确的寡聚体物种:溶液中的单体和二聚体类似物、溶液中的天然T(6)和R(6)六聚体以及相应的多晶样品。值得注意的是,与多肽主链(酰胺I)相关的拉曼带的线宽随着连续的自组装而逐渐变窄。虽然二聚化抑制了分子间β-折叠处的波动,但酰胺I带的去卷积表明六聚体的形成稳定了螺旋和非螺旋元件。尽管溶液中单体的结构类似于晶体原体,但其在天然组装体中的包埋抑制了主链波动。在交叉β-纤维中胰岛素重组时,观察到β-折叠特异性酰胺I带进一步变窄。天然胰岛素单体增强的灵活性与分子动力学模拟结果一致。这种构象波动可能引发淀粉样蛋白原核的形成,并在受体结合时实现诱导契合。

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