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具有扩展底物识别区域的反式作用丁型肝炎病毒核酶的设计与特性

Design and properties of trans-acting HDV ribozymes with extended substrate recognition regions.

作者信息

Hori T, Guo F, Tanaka Y, Uesugi S

机构信息

Department of Environment and Natural Sciences, Graduate School of Environment and Information Sciences, Yokohama National University, 79-7 Tokiwadai, Hodogaya-ku, Yokohama 240-8501, Japan.

出版信息

Nucleic Acids Res Suppl. 2001(1):201-2. doi: 10.1093/nass/1.1.201.

DOI:10.1093/nass/1.1.201
PMID:12836334
Abstract

We constructed a new type of trans-acting HDV ribozyme which is based on the antigenomic RNA sequence and has an additional binding site to form an extra stem (P5) of 7 base-pairs introduced in the J1/2 region between P1 and P2 stems. A substrate RNA containing the two binding sequences was specifically cleaved while no selectivity was observed in the case of the wild-type ribozyme with only one binding site. Mutation to produce two mismatch base-pairs in the central part of the P5 stem abolished the specific cleavage.

摘要

我们构建了一种新型的反式作用丁型肝炎病毒核酶,它基于反基因组RNA序列,并且有一个额外的结合位点,可在P1和P2茎之间的J1/2区域形成一个由7个碱基对组成的额外茎(P5)。含有这两个结合序列的底物RNA被特异性切割,而在只有一个结合位点的野生型核酶的情况下未观察到选择性。在P5茎中部产生两个错配碱基对的突变消除了特异性切割。

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Design and properties of trans-acting HDV ribozymes with extended substrate recognition regions.具有扩展底物识别区域的反式作用丁型肝炎病毒核酶的设计与特性
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2
Addition of an extra substrate binding site and partial destabilization of stem structures in HDV ribozyme give rise to high sequence-specificity for its target RNA.在丁型肝炎病毒核酶中添加一个额外的底物结合位点并使茎结构部分不稳定,会使其对靶RNA产生高度的序列特异性。
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