Suppr超能文献

大肠杆菌酮泛解酸羟甲基转移酶晶体结构的比较分析证实,它是(βα)8磷酸烯醇式丙酮酸/丙酮酸超家族的成员。

Comparative analysis of the Escherichia coli ketopantoate hydroxymethyltransferase crystal structure confirms that it is a member of the (betaalpha)8 phosphoenolpyruvate/pyruvate superfamily.

作者信息

Schmitzberger Florian, Smith Alison G, Abell Chris, Blundell Tom L

机构信息

Department of Biochemistry, University of Cambridge, Cambridge CB2 1GA, United Kingdom.

出版信息

J Bacteriol. 2003 Jul;185(14):4163-71. doi: 10.1128/JB.185.14.4163-4171.2003.

Abstract

Escherichia coli ketopantoate hydroxymethyltransferase (KPHMT) catalyzes the first step in the biosynthesis pathway of pantothenate (vitamin B(5)), the transfer of a hydroxymethyl group onto alpha-ketoisovalerate. Here we describe a detailed comparative analysis of the KPHMT crystal structure and the identification of structural homologues, some of which have remarkable similarities in their active sites, modes of binding to substrates, and mechanisms. We show that KPHMT forms a family within the phosphoenolpyruvate/pyruvate superfamily. Based on the analysis, we propose that in this superfamily there should be a subdivision into two groups. This paper completes our structural analysis of the E. coli enzymes in the pantothenate pathway.

摘要

大肠杆菌酮泛解酸羟甲基转移酶(KPHMT)催化泛酸(维生素B5)生物合成途径的第一步,即将羟甲基转移到α-酮异戊酸上。在此,我们描述了KPHMT晶体结构的详细比较分析以及结构同源物的鉴定,其中一些在活性位点、与底物的结合模式和机制方面具有显著相似性。我们表明,KPHMT在磷酸烯醇丙酮酸/丙酮酸超家族中形成一个家族。基于该分析,我们提出在这个超家族中应细分为两组。本文完成了我们对泛酸途径中大肠杆菌酶的结构分析。

相似文献

5
Organisation of the pantothenate (vitamin B5) biosynthesis pathway in higher plants.
Plant J. 2004 Jan;37(1):61-72. doi: 10.1046/j.1365-313x.2003.01940.x.
6
Structural insights into the evolution of the pantothenate-biosynthesis pathway.
Biochem Soc Trans. 2003 Jun;31(Pt 3):563-71. doi: 10.1042/bst0310563.
7
Towards engineering increased pantothenate (vitamin B(5)) levels in plants.
Plant Mol Biol. 2008 Nov;68(4-5):493-503. doi: 10.1007/s11103-008-9386-5. Epub 2008 Aug 23.

引用本文的文献

1

本文引用的文献

1
Raster3D: photorealistic molecular graphics.
Methods Enzymol. 1997;277:505-24. doi: 10.1016/s0076-6879(97)77028-9.
5
The structure of L-ribulose-5-phosphate 4-epimerase: an aldolase-like platform for epimerization.
Biochemistry. 2001 Dec 11;40(49):14763-71. doi: 10.1021/bi0112513.
6
The structure and domain organization of Escherichia coli isocitrate lyase.
Acta Crystallogr D Biol Crystallogr. 2001 Sep;57(Pt 9):1209-18. doi: 10.1107/s0907444901008642. Epub 2001 Aug 23.
7
The evolution and structural anatomy of the small molecule metabolic pathways in Escherichia coli.
J Mol Biol. 2001 Aug 24;311(4):693-708. doi: 10.1006/jmbi.2001.4912.
9
Structure of isocitrate lyase, a persistence factor of Mycobacterium tuberculosis.
Nat Struct Biol. 2000 Aug;7(8):663-8. doi: 10.1038/77964.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验