Ostrowski Jerzy, Kawata Yasunobu, Schullery Daniel S, Denisenko Oleg N, Bomsztyk Karol
Department of Medicine, University of Washington, Seattle, WA 98195, USA.
Nucleic Acids Res. 2003 Jul 15;31(14):3954-62. doi: 10.1093/nar/gkg452.
The heterogeneous nuclear ribonucleoprotein K protein is an RNA- and DNA-binding protein implicated in the regulation of multiple processes that comprise gene expression. We used chromatin immunoprecipitation (ChIP) assays to explore K protein interactions with serum-inducible, constitutively expressed and untranscribed gene loci in vivo. In the rat HTC-IR hepatoma cell line, serum treatment induced transient increases in the mRNA levels of two immediate-early genes, egr-1 and c-myc. ChIP analysis showed that the induction of egr-1 and c-myc genes was associated with a transient recruitment of K protein to multiple sites within each of these loci, including the promoter and transcribed regions. In contrast, recruitment of K protein to the constitutively transcribed beta-actin locus and to randomly chosen non-transcribed loci was far weaker. In rat mesangial cells, c-myc was constitutively expressed while egr-1 remained serum responsive. In these cells, ChIP analysis showed serum-induced recruitment to the inducible egr-1 but not to the c-myc locus. Pre-treatment with the transcription inhibitor actinomycin D blocked the inducible but not the constitutive binding of K protein to these loci. Taken together, the results of this study suggest that the transient recruitment of K protein to serum-responsive loci depends on the inducible transcription of these immediate-early genes.
不均一核核糖核蛋白K蛋白是一种与RNA和DNA结合的蛋白质,参与包括基因表达在内的多个过程的调控。我们利用染色质免疫沉淀(ChIP)试验,在体内探索K蛋白与血清诱导型、组成型表达和未转录基因位点的相互作用。在大鼠HTC-IR肝癌细胞系中,血清处理诱导了两种即早基因egr-1和c-myc的mRNA水平短暂升高。ChIP分析表明,egr-1和c-myc基因的诱导与K蛋白短暂募集到这些位点中的多个位点有关,包括启动子和转录区域。相比之下,K蛋白募集到组成型转录的β-肌动蛋白位点和随机选择的非转录位点的情况则弱得多。在大鼠系膜细胞中,c-myc组成型表达,而egr-1仍然对血清有反应。在这些细胞中,ChIP分析显示血清诱导K蛋白募集到可诱导的egr-1位点,但未募集到c-myc位点。用转录抑制剂放线菌素D预处理可阻断K蛋白对这些位点的诱导性结合,但不影响其组成型结合。综上所述,本研究结果表明,K蛋白短暂募集到血清反应性位点取决于这些即早基因的诱导转录。