Suppr超能文献

在能量下坡景观上的快速蛋白质折叠。

Fast protein folding on downhill energy landscape.

作者信息

Cavalli Andrea, Haberthür Urs, Paci Emanuele, Caflisch Amedeo

机构信息

Department of Biochemistry, University of Zürich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland.

出版信息

Protein Sci. 2003 Aug;12(8):1801-3. doi: 10.1110/ps.0366103.

Abstract

Proteins fold in a time range of microseconds to minutes despite the large amount of possible conformers. Molecular dynamics simulations of a three-stranded antiparallel beta-sheet peptide (for a total of 12.6 microsec and 72 folding events) show that at the melting temperature the unfolded state ensemble contains many more conformers than those sampled during a folding event.

摘要

尽管存在大量可能的构象,但蛋白质在微秒到分钟的时间范围内折叠。对一个三链反平行β-折叠肽进行分子动力学模拟(总共12.6微秒和72次折叠事件)表明,在解链温度下,未折叠状态的集合包含的构象比折叠事件中采样的构象多得多。

相似文献

7
Computer simulations of protein folding by targeted molecular dynamics.通过靶向分子动力学对蛋白质折叠进行计算机模拟。
Proteins. 2000 May 15;39(3):252-60. doi: 10.1002/(sici)1097-0134(20000515)39:3<252::aid-prot80>3.0.co;2-3.
8
Folding cooperativity in a three-stranded beta-sheet model.三链β-折叠模型中的折叠协同性
J Mol Biol. 2005 Sep 16;352(2):370-81. doi: 10.1016/j.jmb.2005.07.036.

引用本文的文献

3
Behind the folding funnel diagram.折叠漏斗图背后的故事。
Nat Chem Biol. 2011 Jun 17;7(7):401-4. doi: 10.1038/nchembio.565.
6
CHARMM: the biomolecular simulation program.CHARMM:生物分子模拟程序。
J Comput Chem. 2009 Jul 30;30(10):1545-614. doi: 10.1002/jcc.21287.

本文引用的文献

2
Reply.回复。
Angew Chem Int Ed Engl. 2001 Dec 17;40(24):4616-4618. doi: 10.1002/1521-3773(20011217)40:24<4616::aid-anie4616>3.0.co;2-b.
3
Molecular dynamics simulations of protein folding from the transition state.从过渡态出发的蛋白质折叠的分子动力学模拟
Proc Natl Acad Sci U S A. 2002 May 14;99(10):6719-24. doi: 10.1073/pnas.092686399. Epub 2002 Apr 30.
9
Folding simulations of a three-stranded antiparallel beta -sheet peptide.三链反平行β-折叠肽的折叠模拟
Proc Natl Acad Sci U S A. 2000 Sep 26;97(20):10780-5. doi: 10.1073/pnas.190324897.
10
Fast kinetics and mechanisms in protein folding.蛋白质折叠中的快速动力学与机制
Annu Rev Biophys Biomol Struct. 2000;29:327-59. doi: 10.1146/annurev.biophys.29.1.327.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验