Finnilä Saara, Majamaa Kari
Department of Neurology, University of Oulu, FIN-90014 Oulu, Finland.
Eur J Hum Genet. 2003 Sep;11(9):652-8. doi: 10.1038/sj.ejhg.5201017.
The chromosomal region around marker D8S277 is thought to contribute to susceptibility to hearing impairment in patients with the 1555A>G mutation in mtDNA. We have previously described a family with this mutation, in which some of the members had profound hearing loss, some had a hearing impairment for high-frequency tones and some had completely normal hearing. The phenotypes were thus compatible with a recessive inheritance pattern. We fine-mapped the region around marker D8S277 by sequencing single nucleotide polymorphisms (SNPs) along the 11 Mb region on 8p23, and also sequenced eight defensin genes in the vicinity of D8S277 and the genes GJB2, GJB3, MTO1 and TIMM8A. SNP haplotypes were constructed using the SimWalk2 program. The three persons with a profound hearing loss had identical genotypes in the 11 Mb region on 8p23, but this genotype was also present in a person with normal hearing. The persons with a hearing impairment for high-frequency tones did not share any common haplotype, but one of them shared a genotype with a healthy person. Thus, haplotype comparison excluded a contribution of the region concerned to the expression of hearing impairment in this family, nor could the susceptibility be assigned to the GJB2, GJB3, MTO1 or TIMM8A genes. Extended pedigrees with 1555A>G, such as the present one, provide a good opportunity to identify a modifying nuclear factor. The chromosomal region around 8p23 could be excluded here as the locus for susceptibility to hearing impairment.
人们认为,线粒体DNA(mtDNA)中1555A>G突变患者的听力损伤易感性与标记物D8S277周围的染色体区域有关。我们之前描述过一个患有这种突变的家族,其中一些成员有严重听力损失,一些成员有高频音调听力损伤,还有一些成员听力完全正常。因此,这些表型与隐性遗传模式相符。我们通过对8号染色体短臂23区11 Mb区域的单核苷酸多态性(SNP)进行测序,对标记物D8S277周围的区域进行了精细定位,还对D8S277附近的8个防御素基因以及GJB2、GJB3、MTO1和TIMM8A基因进行了测序。使用SimWalk2程序构建了SNP单倍型。三名严重听力损失患者在8号染色体短臂23区的11 Mb区域具有相同的基因型,但一名听力正常的人也具有这种基因型。高频音调听力损伤患者没有共享任何常见单倍型,但其中一人与一名健康人共享一种基因型。因此,单倍型比较排除了该相关区域对这个家族中听力损伤表达的影响,也不能将易感性归因于GJB2、GJB3、MTO1或TIMM8A基因。像本研究这样带有1555A>G突变的扩展家系为鉴定一个修饰核因子提供了很好的机会。这里可以排除8号染色体短臂23区周围的染色体区域作为听力损伤易感性的位点。